ENSDARG00000058560


Danio rerio

Features
Gene ID: ENSDARG00000058560
  
Biological name :adrm1
  
Synonyms : adhesion regulating molecule 1 / adrm1 / Q6NZ09
  
Possible biological names infered from orthology : Gm9774 / Proteasomal ubiquitin receptor ADRM1 / Q16186 / Q9JKV1
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 9560797
Gene end: 9567306
  
Corresponding Affymetrix probe sets: Dr.324.2.A1_a_at (Zebrafish Array)   NM_201013_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000075874
Ensembl peptide - ENSDARP00000150387
Ensembl peptide - ENSDARP00000122006
Ensembl peptide - ENSDARP00000113720
Ensembl peptide - ENSDARP00000108594
NCBI entrez gene - 796450     See in Manteia.
RefSeq - NM_201013
RefSeq - XM_005161962
RefSeq - XM_021469854
RefSeq Peptide - NP_957307
swissprot - Q6NZ09
swissprot - E9QJJ5
swissprot - E9QIC6
swissprot - E9QHX7
swissprot - A8WGS1
ZFIN ID - ZDB-GENE-040426-905
Ensembl - ENSDARG00000058560
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ADRM1ENSGALG00000005200Gallus gallus
 ADRM1ENSG00000130706Homo sapiens
 Adrm1ENSMUSG00000039041Mus musculus
 Gm9774ENSMUSG00000042165Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006773  Proteasomal ubiquitin receptor Rpn13/ADRM1
 IPR032368  UCH-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0010950 positive regulation of endopeptidase activity IEA
 biological_processGO:0043248 proteasome assembly ISS
 cellular_componentGO:0000502 proteasome complex ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0008541 proteasome regulatory particle, lid subcomplex IBA
 molecular_functionGO:0043130 ubiquitin binding IBA
 molecular_functionGO:0061133 endopeptidase activator activity IBA
 molecular_functionGO:0070628 proteasome binding IBA


Pathways (from Reactome)
Pathway description
UCH proteinases
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000103404 uchl5 / ubiquitin carboxyl-terminal hydrolase L5 / Q9WUP7* / Q9Y5K5* / ubiquitin C-terminal hydrolase L5* / ubiquitin carboxyl-terminal esterase L5*  / reaction / complex






 

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contact: otassy@igbmc.fr