ENSDARG00000058638


Danio rerio

Features
Gene ID: ENSDARG00000058638
  
Biological name :si:ch211-71m22.1
  
Synonyms : si:ch211-71m22.1
  
Possible biological names infered from orthology : 1700057G04Rik / A0PG75 / O15162 / P58196 / phospholipid scramblase 1 / phospholipid scramblase 2 / phospholipid scramblase 4 / phospholipid scramblase family member 5 / PLSCR1 / PLSCR2 / PLSCR4 / PLSCR5 / Q9DCW2 / Q9JJ00 / Q9NRQ2 / Q9NRY7 / RIKEN cDNA 1700057G04 gene
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 8586415
Gene end: 8611675
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147143
Ensembl peptide - ENSDARP00000148106
Ensembl peptide - ENSDARP00000116699
Ensembl peptide - ENSDARP00000145712
NCBI entrez gene - 100149582     See in Manteia.
RefSeq - NM_001128395
RefSeq - XM_009297439
RefSeq Peptide - NP_001121867
swissprot - A5WVT4
ZFIN ID - ZDB-GENE-070705-193
Ensembl - ENSDARG00000058638
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000006805Gallus gallus
 PLSCR5ENSGALG00000006807Gallus gallus
 A0PG75ENSG00000231213Homo sapiens
 O15162ENSG00000188313Homo sapiens
 PLSCR2ENSG00000163746Homo sapiens
 PLSCR4ENSG00000114698Homo sapiens
 1700057G04RikENSMUSG00000074139Mus musculus
 P58196ENSMUSG00000032377Mus musculus
 Plscr1ENSMUSG00000032369Mus musculus
 Plscr2ENSMUSG00000032372Mus musculus
 Plscr5ENSMUSG00000095654Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-71m22.5 / O15162* / P58196* / PLSCR1* / A0PG75* / PLSCR4* / PLSCR5* / Q9DCW2* / Q9JJ00* / Q9NRQ2* / Q9NRY7* / PLSCR2* / 1700057G04Rik* / phospholipid scramblase 2* / phospholipid s...ENSDARG0000009126664
si:ch73-206p6.1 / O15162* / P58196* / PLSCR1* / A0PG75* / PLSCR4* / PLSCR5* / Q9DCW2* / Q9JJ00* / Q9NRQ2* / Q9NRY7* / PLSCR2* / 1700057G04Rik* / phospholipid scramblase 2* / phospholipid sc...ENSDARG0000007746858
plscr3b / phospholipid scramblase 3b / PLSCR3* / Q9NRY6* / Q9JIZ9* / phospholipid scramblase 3*ENSDARG0000006943254
plscr3a / phospholipid scramblase 3a / PLSCR3* / Q9NRY6* / Q9JIZ9* / phospholipid scramblase 3*ENSDARG0000009307852
si:dkey-62k3.6 / PLSCR3* / Q9JIZ9* / Q9NRY6* / phospholipid scramblase 3*ENSDARG0000009161441
si:ch211-71m22.3 / O15162* / P58196* / PLSCR1* / A0PG75* / PLSCR4* / PLSCR5* / Q9DCW2* / Q9JJ00* / Q9NRQ2* / Q9NRY7* / PLSCR2* / 1700057G04Rik* / phospholipid scramblase 2* / phospholipid s...ENSDARG0000007907533
si:ch73-170d6.4 / O15162* / P58196* / PLSCR1* / A0PG75* / PLSCR4* / PLSCR5* / Q9DCW2* / Q9JJ00* / Q9NRQ2* / Q9NRY7* / PLSCR2* / 1700057G04Rik* / phospholipid scramblase 2* / phospholipid sc...ENSDARG0000010246029
CU929150.2ENSDARG0000010082821


Protein motifs (from Interpro)
Interpro ID Name
 IPR005552  Scramblase
 IPR025659  Tubby-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017121 phospholipid scrambling IEA
 biological_processGO:0044782 cilium organization IMP
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane IBA
 molecular_functionGO:0017128 phospholipid scramblase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000150 pronephric duct pronephric duct cilium decreased length , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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