ENSDARG00000058660


Danio rerio

Features
Gene ID: ENSDARG00000058660
  
Biological name :ilf3a
  
Synonyms : ilf3a / interleukin enhancer binding factor 3a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 8363629
Gene end: 8392200
  
Corresponding Affymetrix probe sets: Dr.24888.1.A1_at (Zebrafish Array)   Dr.24888.2.S1_at (Zebrafish Array)   NM_001030065_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000153191
Ensembl peptide - ENSDARP00000122812
Ensembl peptide - ENSDARP00000076002
NCBI entrez gene - 324431     See in Manteia.
RefSeq - NM_001030065
RefSeq - XM_005165723
RefSeq Peptide - NP_001025236
swissprot - F1QZW7
swissprot - F1QRI4
ZFIN ID - ZDB-GENE-030131-3151
Ensembl - ENSDARG00000058660
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ilf3b / interleukin enhancer binding factor 3b / ILF3* / Q9Z1X4* / Q12906* / interleukin enhancer binding factor 3*ENSDARG0000010517745
strbp / spermatid perinuclear RNA binding protein / Q91WM1* / Q96SI9*ENSDARG0000002145537
zfr / zinc finger RNA binding protein / O88532* / Q96KR1*ENSDARG0000002710924
zfr2 / zinc finger RNA binding protein 2 / Q9UPR6*ENSDARG0000007168323
ilf2 / Q6NZ06 / interleukin enhancer binding factor 2 / Q12905* / Q9CXY6*ENSDARG0000001459110


Protein motifs (from Interpro)
Interpro ID Name
 IPR006561  DZF domain
 IPR014720  Double-stranded RNA-binding domain
 IPR033099  Interleukin enhancer-binding factor 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007283 spermatogenesis IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr