ENSDARG00000105177


Danio rerio

Features
Gene ID: ENSDARG00000105177
  
Biological name :ilf3b
  
Synonyms : ilf3b / interleukin enhancer binding factor 3b
  
Possible biological names infered from orthology : ILF3 / interleukin enhancer binding factor 3 / Q12906 / Q9Z1X4
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 13842554
Gene end: 13879635
  
Corresponding Affymetrix probe sets: Dr.20053.1.S1_at (Zebrafish Array)   Dr.20053.2.A1_at (Zebrafish Array)   NM_212599_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000129964
Ensembl peptide - ENSDARP00000148432
Ensembl peptide - ENSDARP00000140809
Ensembl peptide - ENSDARP00000138361
Ensembl peptide - ENSDARP00000138304
Ensembl peptide - ENSDARP00000132586
Ensembl peptide - ENSDARP00000130355
NCBI entrez gene - 321868     See in Manteia.
RefSeq - NM_212599
RefSeq Peptide - NP_997764
swissprot - A0A0R4IPU4
swissprot - A0A0R4IHG8
swissprot - A0A0R4IBR5
swissprot - A0A0R4IBM8
swissprot - A0A0R4IUQ9
swissprot - A0A0R4IRK1
ZFIN ID - ZDB-GENE-030131-587
Ensembl - ENSDARG00000105177
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ILF3ENSG00000129351Homo sapiens
 Ilf3ENSMUSG00000032178Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ilf3a / interleukin enhancer binding factor 3aENSDARG0000005866044
strbp / spermatid perinuclear RNA binding protein / Q91WM1* / Q96SI9*ENSDARG0000002145543
zfr / zinc finger RNA binding protein / O88532* / Q96KR1*ENSDARG0000002710923
zfr2 / zinc finger RNA binding protein 2 / Q9UPR6*ENSDARG0000007168322
ilf2 / Q6NZ06 / interleukin enhancer binding factor 2 / Q12905* / Q9CXY6*ENSDARG0000001459110


Protein motifs (from Interpro)
Interpro ID Name
 IPR006561  DZF domain
 IPR014720  Double-stranded RNA-binding domain
 IPR033099  Interleukin enhancer-binding factor 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr