ENSDARG00000021455


Danio rerio

Features
Gene ID: ENSDARG00000021455
  
Biological name :strbp
  
Synonyms : spermatid perinuclear RNA binding protein / strbp
  
Possible biological names infered from orthology : Q91WM1 / Q96SI9
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 9834896
Gene end: 10018794
  
Corresponding Affymetrix probe sets: Dr.12982.1.A1_at (Zebrafish Array)   Dr.15207.1.A1_at (Zebrafish Array)   Dr.25232.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112694
Ensembl peptide - ENSDARP00000151771
Ensembl peptide - ENSDARP00000104616
Ensembl peptide - ENSDARP00000106616
NCBI entrez gene - 557957     See in Manteia.
swissprot - E9QD44
swissprot - F1QB35
swissprot - F1R194
ZFIN ID - ZDB-GENE-030729-18
Ensembl - ENSDARG00000021455
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STRBPENSGALG00000029927Gallus gallus
 STRBPENSG00000165209Homo sapiens
 StrbpENSMUSG00000026915Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ilf3b / interleukin enhancer binding factor 3b / ILF3* / Q9Z1X4* / Q12906* / interleukin enhancer binding factor 3*ENSDARG0000010517752
ilf3a / interleukin enhancer binding factor 3aENSDARG0000005866044
zfr / zinc finger RNA binding protein / O88532* / Q96KR1*ENSDARG0000002710926
zfr2 / zinc finger RNA binding protein 2 / Q9UPR6*ENSDARG0000007168325
ilf2 / Q6NZ06 / interleukin enhancer binding factor 2 / Q12905* / Q9CXY6*ENSDARG0000001459111


Protein motifs (from Interpro)
Interpro ID Name
 IPR006561  DZF domain
 IPR014720  Double-stranded RNA-binding domain
 IPR030446  Spermatid perinuclear RNA-binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007283 spermatogenesis IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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