ENSGALG00000029927


Gallus gallus

Features
Gene ID: ENSGALG00000029927
  
Biological name :STRBP
  
Synonyms : Q5ZIL4 / Spermatid perinuclear RNA-binding protein / STRBP
  
Possible biological names infered from orthology : Q91WM1 / Q96SI9
  
Species: Gallus gallus
  
Chr. number: 17
Strand: -1
Band:
Gene start: 9383431
Gene end: 9417159
  
Corresponding Affymetrix probe sets: Gga.13556.1.S1_at (Chicken Array)   GgaAffx.12873.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053063
Ensembl peptide - ENSGALP00000064181
Ensembl peptide - ENSGALP00000054106
Ensembl peptide - ENSGALP00000045082
NCBI entrez gene - 417105     See in Manteia.
RefSeq - XM_015279429
RefSeq - XM_015279423
RefSeq - XM_015279424
RefSeq - XM_015279426
RefSeq - XM_015279427
RefSeq - XM_015279428
RefSeq - NM_001030680
RefSeq - XM_015279411
RefSeq - XM_015279412
RefSeq - XM_015279413
RefSeq - XM_015279414
RefSeq - XM_015279415
RefSeq - XM_015279416
RefSeq - XM_015279417
RefSeq - XM_015279418
RefSeq - XM_015279419
RefSeq - XM_015279420
RefSeq - XM_015279421
RefSeq - XM_015279422
RefSeq Peptide - NP_001025851
swissprot - A0A1L1RZ90
swissprot - A0A1D5PJR7
swissprot - A0A1D5NXI6
swissprot - Q5ZIL4
Ensembl - ENSGALG00000029927
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 strbpENSDARG00000021455Danio rerio
 STRBPENSG00000165209Homo sapiens
 StrbpENSMUSG00000026915Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZFR* / O88532* / Q96KR1* / zinc finger RNA binding protein*ENSGALG0000003448828
ZFR* / O88532* / Q96KR1* / zinc finger RNA binding protein*ENSGALG0000000323528
ILF2 / interleukin enhancer binding factor 2 / Q12905* / Q9CXY6*ENSGALG0000001157012


Protein motifs (from Interpro)
Interpro ID Name
 IPR006561  DZF domain
 IPR014720  Double-stranded RNA-binding domain
 IPR030446  Spermatid perinuclear RNA-binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0007638 mechanosensory behavior IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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