ENSG00000165209


Homo sapiens

Features
Gene ID: ENSG00000165209
  
Biological name :STRBP
  
Synonyms : Q96SI9 / spermatid perinuclear RNA binding protein / STRBP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q33.3
Gene start: 123109500
Gene end: 123268576
  
Corresponding Affymetrix probe sets: 223245_at (Human Genome U133 Plus 2.0 Array)   223246_s_at (Human Genome U133 Plus 2.0 Array)   223522_at (Human Genome U133 Plus 2.0 Array)   229513_at (Human Genome U133 Plus 2.0 Array)   233251_at (Human Genome U133 Plus 2.0 Array)   233252_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432626
Ensembl peptide - ENSP00000431531
Ensembl peptide - ENSP00000433106
Ensembl peptide - ENSP00000321347
Ensembl peptide - ENSP00000354271
Ensembl peptide - ENSP00000384292
Ensembl peptide - ENSP00000415968
Ensembl peptide - ENSP00000431190
NCBI entrez gene - 55342     See in Manteia.
OMIM - 611138
RefSeq - XM_017014898
RefSeq - NM_018387
RefSeq - XM_017014890
RefSeq - XM_017014891
RefSeq - XM_017014892
RefSeq - XM_017014893
RefSeq - XM_017014894
RefSeq - XM_017014895
RefSeq - XM_017014896
RefSeq - XM_017014897
RefSeq - NM_001171137
RefSeq Peptide - NP_001164608
RefSeq Peptide - NP_060857
swissprot - H0YD70
swissprot - V9HWK4
swissprot - E9PKQ0
swissprot - Q5JPA5
swissprot - H0YC91
swissprot - Q96SI9
swissprot - H0YD00
Ensembl - ENSG00000165209
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 strbpENSDARG00000021455Danio rerio
 STRBPENSGALG00000029927Gallus gallus
 StrbpENSMUSG00000026915Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ILF3 / Q12906 / interleukin enhancer binding factor 3ENSG0000012935160
ZFR / Q96KR1 / zinc finger RNA binding proteinENSG0000005609728
ZFR2 / Q9UPR6 / zinc finger RNA binding protein 2ENSG0000010527826
ILF2 / Q12905 / interleukin enhancer binding factor 2ENSG0000014362113


Protein motifs (from Interpro)
Interpro ID Name
 IPR006561  DZF domain
 IPR014720  Double-stranded RNA-binding domain
 IPR030446  Spermatid perinuclear RNA-binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0007638 mechanosensory behavior IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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