ENSMUSG00000032178


Mus musculus

Features
Gene ID: ENSMUSG00000032178
  
Biological name :Ilf3
  
Synonyms : Ilf3 / Interleukin enhancer-binding factor 3 / Q9Z1X4
  
Possible biological names infered from orthology : Q12906
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A3
Gene start: 21367871
Gene end: 21405361
  
Corresponding Affymetrix probe sets: 10583610 (MoGene1.0st)   1422546_at (Mouse Genome 430 2.0 Array)   1436802_at (Mouse Genome 430 2.0 Array)   1457739_at (Mouse Genome 430 2.0 Array)   1460669_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000149483
Ensembl peptide - ENSMUSP00000149321
Ensembl peptide - ENSMUSP00000149786
Ensembl peptide - ENSMUSP00000151032
Ensembl peptide - ENSMUSP00000150586
Ensembl peptide - ENSMUSP00000150280
Ensembl peptide - ENSMUSP00000150164
Ensembl peptide - ENSMUSP00000150047
Ensembl peptide - ENSMUSP00000065770
Ensembl peptide - ENSMUSP00000111074
Ensembl peptide - ENSMUSP00000148924
Ensembl peptide - ENSMUSP00000149155
NCBI entrez gene - 16201     See in Manteia.
MGI - MGI:1339973
RefSeq - XM_017313152
RefSeq - XM_011242404
RefSeq - XM_011242405
RefSeq - XM_017313138
RefSeq - XM_017313139
RefSeq - XM_017313140
RefSeq - XM_017313141
RefSeq - XM_017313142
RefSeq - XM_017313143
RefSeq - XM_017313144
RefSeq - XM_017313145
RefSeq - XM_017313146
RefSeq - XM_017313147
RefSeq - XM_017313148
RefSeq - XM_017313149
RefSeq - XM_017313150
RefSeq - XM_017313151
RefSeq - NM_001042707
RefSeq - NM_001042708
RefSeq - NM_001042709
RefSeq - NM_001277321
RefSeq - NM_001277322
RefSeq - NM_010561
RefSeq - XM_006510029
RefSeq - XM_006510030
RefSeq - XM_006510031
RefSeq - XM_006510034
RefSeq - XM_006510036
RefSeq - XM_006510037
RefSeq - XM_011242403
RefSeq Peptide - NP_001264251
RefSeq Peptide - NP_034691
RefSeq Peptide - NP_001036172
RefSeq Peptide - NP_001036173
RefSeq Peptide - NP_001036174
RefSeq Peptide - NP_001264250
swissprot - A0A1L1SU19
swissprot - Q45VK6
swissprot - Q9Z1X4
swissprot - A0A1L1SQ69
swissprot - Q45VK5
swissprot - A0A1L1STE4
swissprot - A0A1L1ST48
swissprot - A0A1L1SSU8
swissprot - A0A1L1SR62
swissprot - A0A1L1SQR7
Ensembl - ENSMUSG00000032178
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ilf3bENSDARG00000105177Danio rerio
 ILF3ENSG00000129351Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Strbp / Q91WM1 / spermatid perinuclear RNA binding protein / Q96SI9*ENSMUSG0000002691545
Zfr / O88532 / zinc finger RNA binding protein / Q96KR1*ENSMUSG0000002220121
Zfr2 / zinc finger RNA binding protein 2 / Q9UPR6*ENSMUSG0000003494919
Ilf2 / Q9CXY6 / Interleukin enhancer-binding factor 2 / Q12905*ENSMUSG0000000101610


Protein motifs (from Interpro)
Interpro ID Name
 IPR006561  DZF domain
 IPR014720  Double-stranded RNA-binding domain
 IPR033099  Interleukin enhancer-binding factor 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0006479 protein methylation ISO
 biological_processGO:0017148 negative regulation of translation IMP
 biological_processGO:0045071 negative regulation of viral genome replication IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISO
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISO
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005576 extracellular region ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000746 weakness "state of being infirm or less strong than littermates" [J:45400]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0000759 abnormal skeletal muscle morphology "anomalous structure of any of the striated muscle fibers connected at either or both extremeties with the bony framework of the body" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0000761 thin diaphragm muscle "reduced thickness of the diaphragm muscle" [MGI:CLS, J:60159]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0001404 no spontaneous movement "failure to make any change in position or posture" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:60159]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0001436 abnormal suckling behavior "reduced ability or inability to exert suction by the mouth, or atypical suckling pattern" [J:16461]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0001575 cyanosis "a dark bluish or purple skin discoloration resulting from deficient oxygenation of the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60159]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0002280 abnormal intercostal muscle morphology "anomaly in the respiratory muscles that arise from the lower border of one rib and insert into the upper border of the adjoining rib " [MeSH:National Library of Medicine - Medical Subject Headings , 2003, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0002418 increased susceptibility to viral infection "greater likelihood that an organism will develop ill effects from a viral infection or from components of or toxins produced by a virus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Esr1tm1.2Awo/Esr1tm1.2Awo,Kiss1tm1.1(cre)Uboe/Kiss1+
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0003084 abnormal skeletal muscle fiber morphology "anomalous structure of the skeletal muscle fibers, the large multinucleated cells that make up the skeletal muscles" [smb:Susan M. Bello, Mouse Genome Informatics Curator, Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0005426 tachypnea "rapid breathing" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0006042 increased apoptosis "greater than normal programmed cell death" [RGD:Rat Genome Database submission, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0009674 decreased birth weight "reduction in average weight at birth compared to controls" [RGD:cur "Rat Genome Database submission"]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0009703 decreased birth body size "reduction in average body size at birth compared to controls" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Flgft/Flgft,Tmem79ma/Tmem79ma
Genetic Background: involves: C57BL/6J * CBA/CaGr

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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