ENSDARG00000059349


Danio rerio

Features
Gene ID: ENSDARG00000059349
  
Biological name :homer2
  
Synonyms : homer2 / homer scaffolding protein 2
  
Possible biological names infered from orthology : Homer protein homolog 2 / Q9NSB8 / Q9QWW1
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 1615
Gene end: 2758
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000076885
swissprot - F1QT65
ZFIN ID - ZDB-GENE-050522-417
Ensembl - ENSDARG00000059349
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOMER2ENSGALG00000006008Gallus gallus
 HOMER2ENSG00000103942Homo sapiens
 Homer2ENSMUSG00000025813Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
homer3b / homer scaffolding protein 3b / Q9NSC5* / HOMER3* / Q99JP6* / Homer protein homolog 3 * / homer scaffolding protein 3*ENSDARG0000001078932
homer1b / homer scaffolding protein 1b / Q9Z2Y3* / HOMER1* / Q86YM7* / Homer protein homolog 1 * / homer scaffolding protein 1*ENSDARG0000010175931
homer3a / homer scaffolding protein 3aENSDARG000001025322


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021628 olfactory nerve formation IMP
 biological_processGO:0071699 olfactory placode morphogenesis IMP
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000554 olfactory epithelium olfactory epithelium organization quality , abnormal
Show

 ZFA:0005661 olfactory bulb glomerulus olfactory bulb glomerulus malformed , abnormal
olfactory bulb glomerulus aplastic/hypoplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000059349 homer2 / homer scaffolding protein 2 / Q9NSB8*  / reaction / complex
 ENSDARG00000101759 homer1b / homer scaffolding protein 1b / Q9Z2Y3* / HOMER1* / Q86YM7* / Homer protein homolog 1 * / homer scaffolding protein 1*  / complex / reaction
 ENSDARG00000026796 grm1a / glutamate receptor, metabotropic 1a / GRM1* / P97772* / Q13255* / glutamate metabotropic receptor 1* / Metabotropic glutamate receptor 1 *  / reaction / complex
 ENSDARG00000004445 grm5a / glutamate receptor, metabotropic 5a / GRM5* / P41594* / glutamate metabotropic receptor 5*  / reaction / complex
 ENSDARG00000098320 grm1b / glutamate receptor, metabotropic 1b / GRM1* / P97772* / Q13255* / glutamate metabotropic receptor 1* / Metabotropic glutamate receptor 1 *  / reaction / complex






 

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