ENSDARG00000101759


Danio rerio

Features
Gene ID: ENSDARG00000101759
  
Biological name :homer1b
  
Synonyms : homer1b / homer scaffolding protein 1b
  
Possible biological names infered from orthology : HOMER1 / Homer protein homolog 1 / homer scaffolding protein 1 / Q86YM7 / Q9Z2Y3
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 51774983
Gene end: 51830997
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137994
Ensembl peptide - ENSDARP00000139264
NCBI entrez gene - 436769     See in Manteia.
RefSeq - NM_001002496
RefSeq - NM_001326290
RefSeq Peptide - NP_001002496
RefSeq Peptide - NP_001313219
swissprot - A0A0R4INT7
swissprot - B8JIC5
ZFIN ID - ZDB-GENE-040801-44
Ensembl - ENSDARG00000101759
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOMER1ENSGALG00000014813Gallus gallus
 HOMER1ENSG00000152413Homo sapiens
 Homer1ENSMUSG00000007617Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
homer3b / homer scaffolding protein 3b / Q9NSC5* / HOMER3* / Q99JP6* / Homer protein homolog 3 * / homer scaffolding protein 3*ENSDARG0000001078942
homer3a / homer scaffolding protein 3aENSDARG0000010253220
homer2 / homer scaffolding protein 2 / Q9NSB8*ENSDARG0000005934914


Protein motifs (from Interpro)
Interpro ID Name
 IPR000697  WH1/EVH1 domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006874 cellular calcium ion homeostasis IGI
 biological_processGO:0061061 muscle structure development IMP
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0035256 G-protein coupled glutamate receptor binding IBA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism anterior-posterior axis bent , abnormal
Show

 ZFA:0001117 post-vent region post-vent region muscle shortened , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000059349 homer2 / homer scaffolding protein 2 / Q9NSB8*  / reaction / complex
 ENSDARG00000101759 homer1b / homer scaffolding protein 1b / Q9Z2Y3* / HOMER1* / Q86YM7* / Homer protein homolog 1 * / homer scaffolding protein 1*  / reaction / complex
 ENSDARG00000098320 grm1b / glutamate receptor, metabotropic 1b / GRM1* / P97772* / Q13255* / glutamate metabotropic receptor 1* / Metabotropic glutamate receptor 1 *  / complex / reaction
 ENSDARG00000026796 grm1a / glutamate receptor, metabotropic 1a / GRM1* / P97772* / Q13255* / glutamate metabotropic receptor 1* / Metabotropic glutamate receptor 1 *  / complex / reaction
 ENSDARG00000004445 grm5a / glutamate receptor, metabotropic 5a / GRM5* / P41594* / glutamate metabotropic receptor 5*  / reaction / complex






 

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