ENSDARG00000059557


Danio rerio

Features
Gene ID: ENSDARG00000059557
  
Biological name :xylt2
  
Synonyms : xylosyltransferase II / xylt2
  
Possible biological names infered from orthology : Q9EPL0 / Q9H1B5 / xylosyltransferase 2
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 60177774
Gene end: 60226027
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000077337
NCBI entrez gene - 563446     See in Manteia.
RefSeq - NM_001130778
RefSeq - XM_009299859
RefSeq Peptide - NP_001124250
swissprot - E7F216
ZFIN ID - ZDB-GENE-081022-125
Ensembl - ENSDARG00000059557
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 XYLT2ENSGALG00000007702Gallus gallus
 XYLT2ENSG00000015532Homo sapiens
 Xylt2ENSMUSG00000020868Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xylt1 / xylosyltransferase I / Q86Y38* / xylosyltransferase 1*ENSDARG0000006124851
gcnt7 / glucosaminyl (N-acetyl) transferase family member 7 / Q3V3K7* / Q6ZNI0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 *ENSDARG0000004060811
Q71SG7 / gcnt4a / glucosaminyl (N-acetyl) transferase 4, core 2, a / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotei...ENSDARG0000003519810
si:dkeyp-87d8.8 / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 *ENSDARG000000447559
gcnt4b / glucosaminyl (N-acetyl) transferase 4, core 2, b / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...ENSDARG000000775509
gcnt3 / glucosaminyl (N-acetyl) transferase 3, mucin type / O95395* / Q5JCT0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 *ENSDARG000000604718


Protein motifs (from Interpro)
Interpro ID Name
 IPR003406  Glycosyl transferase, family 14
 IPR024448  Xylosyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006024 glycosaminoglycan biosynthetic process IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0030158 protein xylosyltransferase activity IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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