ENSDARG00000060471


Danio rerio

Features
Gene ID: ENSDARG00000060471
  
Biological name :gcnt3
  
Synonyms : gcnt3 / glucosaminyl (N-acetyl) transferase 3, mucin type
  
Possible biological names infered from orthology : Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 / O95395 / Q5JCT0
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 34274691
Gene end: 34284144
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000079686
Ensembl peptide - ENSDARP00000155137
Ensembl peptide - ENSDARP00000155909
NCBI entrez gene - 100332076     See in Manteia.
swissprot - F1RAK7
ZFIN ID - ZDB-GENE-110411-253
Ensembl - ENSDARG00000060471
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GCNT3ENSGALG00000044940Gallus gallus
 GCNT3ENSG00000140297Homo sapiens
 Gcnt3ENSMUSG00000032226Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q71SG7 / gcnt4a / glucosaminyl (N-acetyl) transferase 4, core 2, a / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotei...ENSDARG0000003519840
si:dkeyp-87d8.8 / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 *ENSDARG0000004475538
gcnt4b / glucosaminyl (N-acetyl) transferase 4, core 2, b / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...ENSDARG0000007755038
gcnt7 / glucosaminyl (N-acetyl) transferase family member 7 / Q3V3K7* / Q6ZNI0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 *ENSDARG0000004060831
xylt1 / xylosyltransferase I / Q86Y38* / xylosyltransferase 1*ENSDARG0000006124818
xylt2 / xylosyltransferase II / Q9H1B5* / xylosyltransferase 2*ENSDARG0000005955717


Protein motifs (from Interpro)
Interpro ID Name
 IPR003406  Glycosyl transferase, family 14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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