ENSG00000140297


Homo sapiens

Features
Gene ID: ENSG00000140297
  
Biological name :GCNT3
  
Synonyms : GCNT3 / glucosaminyl (N-acetyl) transferase 3, mucin type / O95395
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q22.2
Gene start: 59594875
Gene end: 59640239
  
Corresponding Affymetrix probe sets: 219508_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453774
Ensembl peptide - ENSP00000453928
Ensembl peptide - ENSP00000379377
Ensembl peptide - ENSP00000452741
Ensembl peptide - ENSP00000453453
NCBI entrez gene - 9245     See in Manteia.
OMIM - 606836
RefSeq - NM_004751
RefSeq Peptide - NP_004742
swissprot - H0YMW7
swissprot - A0A024R5T9
swissprot - O95395
swissprot - H0YNA3
swissprot - H0YM40
Ensembl - ENSG00000140297
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gcnt3ENSDARG00000060471Danio rerio
 GCNT3ENSGALG00000044940Gallus gallus
 Gcnt3ENSMUSG00000032226Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GCNT1 / Q02742 / glucosaminyl (N-acetyl) transferase 1, core 2ENSG0000018721049
GCNT4 / Q9P109 / glucosaminyl (N-acetyl) transferase 4, core 2ENSG0000017692838
GCNT2 / Q8N0V5 / glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)ENSG0000011184635
GCNT7 / Q6ZNI0 / glucosaminyl (N-acetyl) transferase family member 7ENSG0000012409132
XYLT2 / Q9H1B5 / xylosyltransferase 2ENSG0000001553220
XYLT1 / Q86Y38 / xylosyltransferase 1ENSG0000010348918


Protein motifs (from Interpro)
Interpro ID Name
 IPR003406  Glycosyl transferase, family 14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002426 immunoglobulin production in mucosal tissue IEA
 biological_processGO:0005975 carbohydrate metabolic process NAS
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation TAS
 biological_processGO:0016266 O-glycan processing TAS
 biological_processGO:0048729 tissue morphogenesis IEA
 biological_processGO:0050892 intestinal absorption IEA
 biological_processGO:0060993 kidney morphogenesis IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity TAS
 molecular_functionGO:0008109 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity TAS
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0047225 acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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