ENSG00000176928


Homo sapiens

Features
Gene ID: ENSG00000176928
  
Biological name :GCNT4
  
Synonyms : GCNT4 / glucosaminyl (N-acetyl) transferase 4, core 2 / Q9P109
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q13.3
Gene start: 75025346
Gene end: 75030899
  
Corresponding Affymetrix probe sets: 220831_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000317027
NCBI entrez gene - 51301     See in Manteia.
OMIM - 616782
RefSeq - NM_016591
RefSeq Peptide - NP_057675
swissprot - Q9P109
Ensembl - ENSG00000176928
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gcnt4aENSDARG00000035198Danio rerio
 gcnt4bENSDARG00000077550Danio rerio
 si:dkeyp-87d8.8ENSDARG00000044755Danio rerio
 GCNT4ENSGALG00000014944Gallus gallus
 Gcnt4ENSMUSG00000091387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GCNT1 / Q02742 / glucosaminyl (N-acetyl) transferase 1, core 2ENSG0000018721039
GCNT3 / O95395 / glucosaminyl (N-acetyl) transferase 3, mucin typeENSG0000014029737
GCNT2 / Q8N0V5 / glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)ENSG0000011184634
GCNT7 / Q6ZNI0 / glucosaminyl (N-acetyl) transferase family member 7ENSG0000012409129
XYLT2 / Q9H1B5 / xylosyltransferase 2ENSG0000001553219
XYLT1 / Q86Y38 / xylosyltransferase 1ENSG0000010348917


Protein motifs (from Interpro)
Interpro ID Name
 IPR003406  Glycosyl transferase, family 14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002121 inter-male aggressive behavior IEA
 biological_processGO:0005975 carbohydrate metabolic process TAS
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation TAS
 biological_processGO:0016266 O-glycan processing TAS
 biological_processGO:0042403 thyroid hormone metabolic process IEA
 biological_processGO:0048729 tissue morphogenesis IEA
 biological_processGO:0048872 homeostasis of number of cells IEA
 biological_processGO:0060993 kidney morphogenesis IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity TAS
 molecular_functionGO:0008109 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity TAS
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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