ENSG00000187210


Homo sapiens

Features
Gene ID: ENSG00000187210
  
Biological name :GCNT1
  
Synonyms : GCNT1 / glucosaminyl (N-acetyl) transferase 1, core 2 / Q02742
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q21.13
Gene start: 76419850
Gene end: 76507416
  
Corresponding Affymetrix probe sets: 205505_at (Human Genome U133 Plus 2.0 Array)   239761_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000365920
Ensembl peptide - ENSP00000390703
Ensembl peptide - ENSP00000415454
NCBI entrez gene - 2650     See in Manteia.
OMIM - 600391
RefSeq - NM_001490
RefSeq - XM_017014621
RefSeq - NM_001097633
RefSeq - NM_001097634
RefSeq - NM_001097635
RefSeq - NM_001097636
RefSeq - XM_017014620
RefSeq Peptide - NP_001091104
RefSeq Peptide - NP_001091105
RefSeq Peptide - NP_001481
RefSeq Peptide - NP_001091102
RefSeq Peptide - NP_001091103
swissprot - Q02742
Ensembl - ENSG00000187210
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GCNT1ENSGALG00000015166Gallus gallus
 Gcnt1ENSMUSG00000038843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GCNT3 / O95395 / glucosaminyl (N-acetyl) transferase 3, mucin typeENSG0000014029750
GCNT4 / Q9P109 / glucosaminyl (N-acetyl) transferase 4, core 2ENSG0000017692841
GCNT2 / Q8N0V5 / glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)ENSG0000011184634
GCNT7 / Q6ZNI0 / glucosaminyl (N-acetyl) transferase family member 7ENSG0000012409131
XYLT2 / Q9H1B5 / xylosyltransferase 2ENSG0000001553221
XYLT1 / Q86Y38 / xylosyltransferase 1ENSG0000010348920


Protein motifs (from Interpro)
Interpro ID Name
 IPR003406  Glycosyl transferase, family 14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0009101 glycoprotein biosynthetic process IMP
 biological_processGO:0016266 O-glycan processing TAS
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0048729 tissue morphogenesis IEA
 biological_processGO:0050901 leukocyte tethering or rolling IMP
 biological_processGO:0060352 cell adhesion molecule production IMP
 biological_processGO:0060993 kidney morphogenesis IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0031985 Golgi cisterna IDA
 molecular_functionGO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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