ENSDARG00000059575


Danio rerio

Features
Gene ID: ENSDARG00000059575
  
Biological name :uhmk1
  
Synonyms : U2AF homology motif (UHM) kinase 1 / uhmk1
  
Possible biological names infered from orthology : P97343 / Q8TAS1 / U2AF homology motif kinase 1
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 35052721
Gene end: 35061467
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000077375
Ensembl peptide - ENSDARP00000145060
NCBI entrez gene - 767721     See in Manteia.
RefSeq - NM_001076659
RefSeq Peptide - NP_001070127
swissprot - F1QK36
ZFIN ID - ZDB-GENE-060929-1014
Ensembl - ENSDARG00000059575
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UHMK1ENSGALG00000002734Gallus gallus
 UHMK1ENSG00000152332Homo sapiens
 Uhmk1ENSMUSG00000026667Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
u2af2b / U2 small nuclear RNA auxiliary factor 2b / U2AF2* / P26369* / P26368* / U2 small nuclear RNA auxiliary factor 2* / U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2*ENSDARG0000001174017
u2af2a / U2 small nuclear RNA auxiliary factor 2a / U2AF2* / P26369* / P26368* / U2 small nuclear RNA auxiliary factor 2* / U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2*ENSDARG0000001250517


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000719  Protein kinase domain
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site
 IPR034371  UHMK1, RNA recognition motif
 IPR034372  Serine/threonine-protein kinase Kist


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0018105 peptidyl-serine phosphorylation IBA
 biological_processGO:0046825 regulation of protein export from nucleus IBA
 cellular_componentGO:0000243 commitment complex IBA
 cellular_componentGO:0016607 nuclear speck IBA
 cellular_componentGO:0035770 ribonucleoprotein granule IBA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 cellular_componentGO:0089701 U2AF IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008187 poly-pyrimidine tract binding IBA
 molecular_functionGO:0030628 pre-mRNA 3"-splice site binding IBA
 molecular_functionGO:0043021 ribonucleoprotein complex binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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