ENSDARG00000060678


Danio rerio

Features
Gene ID: ENSDARG00000060678
  
Biological name :ndst2b
  
Synonyms : N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b / ndst2b
  
Possible biological names infered from orthology : AC022400.6 / bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform 2 / N-deacetylase and N-sulfotransferase 2 / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 / NDST2 / P52849 / P52850
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 35203091
Gene end: 35339564
  
Corresponding Affymetrix probe sets: Dr.17320.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127253
Ensembl peptide - ENSDARP00000143988
NCBI entrez gene - 798226     See in Manteia.
swissprot - E7F995
ZFIN ID - ZDB-GENE-100430-2
Ensembl - ENSDARG00000060678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000005107Gallus gallus
 AC022400.6ENSG00000272916Homo sapiens
 NDST2ENSG00000166507Homo sapiens
 Ndst2ENSMUSG00000039308Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ndst2a / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a / NDST2* / P52850* / P52849* / AC022400.6* / N-deacetylase and N-sulfotransferase 2* / N-deacetylase/N-sulfotransferase (...ENSDARG0000008626968
ndst3 / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 / NDST4* / Q9H3R1* / O95803* / Q9EQH7* / Q9EQW8* / N-deacetylase and N-sulfotransferase 4* / N-deacetylase and N-sulfotrans...ENSDARG0000004177667
ndst1b / si:ch211-151g22.1 / NDST1* / P52848* / N-deacetylase and N-sulfotransferase 1*ENSDARG0000010360667
ndst1a / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a / NDST1* / Q3UHN9* / P52848* / N-deacetylase and N-sulfotransferase 1* / Bifunctional heparan sulfate N-deacetylase/N-sul...ENSDARG0000006239763
hs3st3b1b / heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b / Q9Y663* / Q8BKN6* / Q9QZS6* / Q9Y662* / HS3ST3B1* / HS3ST3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3A1* / h...ENSDARG0000008664512
si:ch211-216b21.2 / Q9Y663* / Q8BKN6* / Q9QZS6* / Q9Y662* / HS3ST3B1* / HS3ST3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3B1*...ENSDARG0000006025311
hs3st3b1a / heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a / Q9Y663* / Q9Y662* / HS3ST3B1* / HS3ST3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3B1* / heparan sulfate-gluco...ENSDARG0000009914911
hs3st3l / heparan sulfate (glucosamine) 3-O-sulfotransferase 3-likeENSDARG0000005990311
si:dkey-121b10.7 / HS3ST6* / Q5GFD5* / Q96QI5* / heparan sulfate-glucosamine 3-sulfotransferase 6* / Heparan sulfate glucosamine 3-O-sulfotransferase 6 *ENSDARG0000005994810
hs3st4 / heparan sulfate (glucosamine) 3-O-sulfotransferase 4 / Q9Y661* / heparan sulfate-glucosamine 3-sulfotransferase 4*ENSDARG0000005264810
hs3st2 / heparan sulfate (glucosamine) 3-O-sulfotransferase 2 / Q673U1* / Q9Y278* / heparan sulfate-glucosamine 3-sulfotransferase 2*ENSDARG0000005961610
hs3st1l2 / heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 / O35310* / HS3ST1* / O14792* / heparan sulfate-glucosamine 3-sulfotransferase 1* / Heparan sulfate glucosamine 3-O-su...ENSDARG000000355789


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR021930  Heparan sulphate-N-deacetylase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
HS-GAG biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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