ENSDARG00000035578


Danio rerio

Features
Gene ID: ENSDARG00000035578
  
Biological name :hs3st1l2
  
Synonyms : heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 / hs3st1l2
  
Possible biological names infered from orthology : Heparan sulfate glucosamine 3-O-sulfotransferase 1 / heparan sulfate-glucosamine 3-sulfotransferase 1 / HS3ST1 / O14792 / O35310
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 21100356
Gene end: 21141090
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000051585
NCBI entrez gene - 562344     See in Manteia.
RefSeq - NM_001039926
RefSeq Peptide - NP_001035015
swissprot - Q29RB5
ZFIN ID - ZDB-GENE-070202-3
Ensembl - ENSDARG00000035578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000006989Gallus gallus
 HS3ST1ENSGALG00000014934Gallus gallus
 HS3ST1ENSG00000002587Homo sapiens
 Hs3st1ENSMUSG00000051022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hs3st3b1b / heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b / Q9Y663* / Q8BKN6* / Q9QZS6* / Q9Y662* / HS3ST3B1* / HS3ST3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3A1* / h...ENSDARG0000008664540
si:ch211-216b21.2 / Q9Y663* / Q8BKN6* / Q9QZS6* / Q9Y662* / HS3ST3B1* / HS3ST3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3B1*...ENSDARG0000006025339
hs3st2 / heparan sulfate (glucosamine) 3-O-sulfotransferase 2 / Q673U1* / Q9Y278* / heparan sulfate-glucosamine 3-sulfotransferase 2*ENSDARG0000005961639
hs3st3b1a / heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a / Q9Y663* / Q9Y662* / HS3ST3B1* / HS3ST3A1* / heparan sulfate-glucosamine 3-sulfotransferase 3B1* / heparan sulfate-gluco...ENSDARG0000009914939
hs3st3l / heparan sulfate (glucosamine) 3-O-sulfotransferase 3-likeENSDARG0000005990338
hs3st4 / heparan sulfate (glucosamine) 3-O-sulfotransferase 4 / Q9Y661* / heparan sulfate-glucosamine 3-sulfotransferase 4*ENSDARG0000005264838
si:dkey-121b10.7 / HS3ST6* / Q5GFD5* / Q96QI5* / heparan sulfate-glucosamine 3-sulfotransferase 6* / Heparan sulfate glucosamine 3-O-sulfotransferase 6 *ENSDARG0000005994837
ndst2b / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b / NDST2* / P52850* / P52849* / AC022400.6* / N-deacetylase and N-sulfotransferase 2* / N-deacetylase/N-sulfotransferase (...ENSDARG0000006067827
ndst1b / si:ch211-151g22.1 / NDST1* / P52848* / N-deacetylase and N-sulfotransferase 1*ENSDARG0000010360626
ndst1a / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a / NDST1* / Q3UHN9* / P52848* / N-deacetylase and N-sulfotransferase 1* / Bifunctional heparan sulfate N-deacetylase/N-sul...ENSDARG0000006239726
ndst3 / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 / NDST4* / Q9H3R1* / O95803* / Q9EQH7* / Q9EQW8* / N-deacetylase and N-sulfotransferase 4* / N-deacetylase and N-sulfotrans...ENSDARG0000004177626
ndst2a / N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a / NDST2* / P52850* / P52849* / AC022400.6* / N-deacetylase and N-sulfotransferase 2* / N-deacetylase/N-sulfotransferase (...ENSDARG0000008626914


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
HS-GAG biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle motile cilium decreased speed , abnormal
Kupffers vesicle motile cilium shortened , abnormal
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 ZFA:0000112 gut gut left/right pattern formation process quality , abnormal
Show

 ZFA:0001094 whole organism whole organism curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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