ENSDARG00000062146


Danio rerio

Features
Gene ID: ENSDARG00000062146
  
Biological name :larp4b
  
Synonyms : La ribonucleoprotein domain family, member 4B / larp4b
  
Possible biological names infered from orthology : La-related protein 4B / Q6A0A2 / Q92615
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 26997798
Gene end: 27019540
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083939
NCBI entrez gene - 563742     See in Manteia.
RefSeq - NM_001077562
RefSeq Peptide - NP_001071030
swissprot - Q05AJ1
ZFIN ID - ZDB-GENE-061027-39
Ensembl - ENSDARG00000062146
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LARP4BENSGALG00000006672Gallus gallus
 LARP4BENSG00000107929Homo sapiens
 Larp4bENSMUSG00000033499Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
larp4aa / La ribonucleoprotein domain family, member 4Aa / LARP4* / Q71RC2* / la-related protein 4 isoform 4 * / La ribonucleoprotein domain family member 4*ENSDARG0000007840132
larp4ab / La ribonucleoprotein domain family, member 4Ab / LARP4* / Q71RC2* / la-related protein 4 isoform 4 * / La ribonucleoprotein domain family member 4*ENSDARG0000007497931


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006630  La-type HTH domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR034900  LARP5, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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