ENSMUSG00000033499


Mus musculus

Features
Gene ID: ENSMUSG00000033499
  
Biological name :Larp4b
  
Synonyms : La-related protein 4B / Larp4b / Q6A0A2
  
Possible biological names infered from orthology : La ribonucleoprotein domain family member 4B / Q92615
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A1
Gene start: 9093881
Gene end: 9174451
  
Corresponding Affymetrix probe sets: 10403428 (MoGene1.0st)   1434597_at (Mouse Genome 430 2.0 Array)   1434598_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000089437
Ensembl peptide - ENSMUSP00000139578
Ensembl peptide - ENSMUSP00000139927
Ensembl peptide - ENSMUSP00000140993
NCBI entrez gene - 217980     See in Manteia.
MGI - MGI:106330
RefSeq - XM_011244254
RefSeq - NM_001311117
RefSeq - NM_172585
RefSeq - XM_006516476
RefSeq - XM_006516477
RefSeq - XM_011244253
RefSeq Peptide - NP_001298046
RefSeq Peptide - NP_766173
swissprot - A0A087WPU9
swissprot - Q6A0A2
Ensembl - ENSMUSG00000033499
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp4bENSDARG00000062146Danio rerio
 LARP4BENSGALG00000006672Gallus gallus
 LARP4BENSG00000107929Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Larp4 / la-related protein 4 isoform 4 / Q71RC2* / La ribonucleoprotein domain family member 4*ENSMUSG0000002302533


Protein motifs (from Interpro)
Interpro ID Name
 IPR006630  La-type HTH domain
 IPR034900  LARP5, RNA recognition motif
 IPR035979  RNA-binding domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0045727 positive regulation of translation ISO
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0010494 cytoplasmic stress granule ISS
 cellular_componentGO:0042788 polysomal ribosome ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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