ENSMUSG00000023025


Mus musculus

Features
Gene ID: ENSMUSG00000023025
  
Biological name :Larp4
  
Synonyms : la-related protein 4 isoform 4 / Larp4
  
Possible biological names infered from orthology : La ribonucleoprotein domain family member 4 / Q71RC2
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: F1
Gene start: 99970065
Gene end: 100016358
  
Corresponding Affymetrix probe sets: 10426827 (MoGene1.0st)   10603252 (MoGene1.0st)   10603254 (MoGene1.0st)   1437177_at (Mouse Genome 430 2.0 Array)   1439010_at (Mouse Genome 430 2.0 Array)   1455102_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000097780
Ensembl peptide - ENSMUSP00000155601
Ensembl peptide - ENSMUSP00000155661
Ensembl peptide - ENSMUSP00000086964
Ensembl peptide - ENSMUSP00000155529
NCBI entrez gene - 207214     See in Manteia.
MGI - MGI:2443114
RefSeq - XM_017316524
RefSeq - NM_001024526
RefSeq - NM_001080948
RefSeq - NM_001284521
RefSeq - NM_001284522
RefSeq - NM_001284523
RefSeq - XM_006520675
RefSeq Peptide - NP_001271450
RefSeq Peptide - NP_001271451
RefSeq Peptide - NP_001271452
RefSeq Peptide - NP_001074417
RefSeq Peptide - NP_001019697
swissprot - G3X9Q6
swissprot - E9Q066
Ensembl - ENSMUSG00000023025
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp4aaENSDARG00000078401Danio rerio
 larp4abENSDARG00000074979Danio rerio
 LARP4ENSGALG00000042122Gallus gallus
 LARP4ENSG00000161813Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Larp4b / Q6A0A2 / La-related protein 4B / Q92615* / La ribonucleoprotein domain family member 4B*ENSMUSG0000003349934


Protein motifs (from Interpro)
Interpro ID Name
 IPR006630  La-type HTH domain
 IPR034903  LARP4, RNA recognition motif
 IPR035979  RNA-binding domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0022604 regulation of cell morphogenesis IEA
 biological_processGO:0045727 positive regulation of translation IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005844 polysome IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008143 poly(A) binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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