ENSDARG00000078401


Danio rerio

Features
Gene ID: ENSDARG00000078401
  
Biological name :larp4aa
  
Synonyms : La ribonucleoprotein domain family, member 4Aa / larp4aa
  
Possible biological names infered from orthology : la-related protein 4 isoform 4 / La ribonucleoprotein domain family member 4 / LARP4 / Q71RC2
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 27511709
Gene end: 27547931
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119719
Ensembl peptide - ENSDARP00000122135
NCBI entrez gene - 100332095     See in Manteia.
swissprot - E9QDP4
swissprot - F1QX31
ZFIN ID - ZDB-GENE-090313-50
Ensembl - ENSDARG00000078401
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LARP4ENSGALG00000042122Gallus gallus
 LARP4ENSG00000161813Homo sapiens
 Larp4ENSMUSG00000023025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
larp4ab / La ribonucleoprotein domain family, member 4Ab / LARP4* / Q71RC2* / la-related protein 4 isoform 4 * / La ribonucleoprotein domain family member 4*ENSDARG0000007497947
larp4b / La ribonucleoprotein domain family, member 4B / Q6A0A2* / Q92615* / La-related protein 4B *ENSDARG0000006214630


Protein motifs (from Interpro)
Interpro ID Name
 IPR006630  La-type HTH domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR034903  LARP4, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr