ENSGALG00000042122


Gallus gallus

Features
Gene ID: ENSGALG00000042122
  
Biological name :LARP4
  
Synonyms : la-related protein 4 / LARP4
  
Possible biological names infered from orthology : la-related protein 4 isoform 4 / La ribonucleoprotein domain family member 4 / Q71RC2
  
Species: Gallus gallus
  
Chr. number: 33
Strand: -1
Band:
Gene start: 224485
Gene end: 236129
  
Corresponding Affymetrix probe sets: Gga.12257.1.S1_at (Chicken Array)   Gga.15742.1.S1_at (Chicken Array)   Gga.2693.1.S1_at (Chicken Array)   GgaAffx.26767.1.S1_at (Chicken Array)   GgaAffx.26767.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045521
NCBI entrez gene - 426876     See in Manteia.
RefSeq - NM_001012700
RefSeq - XM_015300229
RefSeq - XM_015300230
RefSeq Peptide - NP_001012718
swissprot - A0A1D5NYR1
Ensembl - ENSGALG00000042122
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp4aaENSDARG00000078401Danio rerio
 larp4abENSDARG00000074979Danio rerio
 LARP4ENSG00000161813Homo sapiens
 Larp4ENSMUSG00000023025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP4B / La ribonucleoprotein domain family member 4B / Q6A0A2* / Q92615* / La-related protein 4B *ENSGALG0000000667233


Protein motifs (from Interpro)
Interpro ID Name
 IPR006630  La-type HTH domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0022604 regulation of cell morphogenesis IEA
 biological_processGO:0045727 positive regulation of translation IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005844 polysome IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008143 poly(A) binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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