ENSDARG00000062164


Danio rerio

Features
Gene ID: ENSDARG00000062164
  
Biological name :atrn
  
Synonyms : atrn / attractin
  
Possible biological names infered from orthology : O75882 / Q9WU60
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 14006118
Gene end: 14181984
  
Corresponding Affymetrix probe sets: Dr.16547.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000083961
Ensembl peptide - ENSDARP00000118575
NCBI entrez gene - 794975     See in Manteia.
RefSeq - NM_001353962
RefSeq Peptide - NP_001340891
swissprot - F1Q5V0
swissprot - B8JI13
ZFIN ID - ZDB-GENE-090312-21
Ensembl - ENSDARG00000062164
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATRNENSGALG00000016034Gallus gallus
 ATRNENSG00000088812Homo sapiens
 AtrnENSMUSG00000027312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atrnl1a / attractin-like 1a / ATRNL1* / Q5VV63* / Q6A051* / attractin like 1* / Attractin-like protein 1 *ENSDARG0000007718857
atrnl1b / attractin-like 1b / ATRNL1* / Q5VV63* / Q6A051* / attractin like 1* / Attractin-like protein 1 *ENSDARG0000000642057
megf8 / multiple EGF-like-domains 8 / P60882* / Q7Z7M0* / Multiple epidermal growth factor-like domains protein 8 *ENSDARG0000007975125


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR000859  CUB domain
 IPR001304  C-type lectin-like
 IPR002049  Laminin EGF domain
 IPR002165  Plexin repeat
 IPR006652  Kelch repeat type 1
 IPR013032  EGF-like, conserved site
 IPR015915  Kelch-type beta propeller
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR016201  PSI domain
 IPR034011  Attractin-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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