ENSGALG00000016034


Gallus gallus

Features
Gene ID: ENSGALG00000016034
  
Biological name :ATRN
  
Synonyms : ATRN / attractin
  
Possible biological names infered from orthology : O75882 / Q9WU60
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 89786495
Gene end: 89895044
  
Corresponding Affymetrix probe sets: GgaAffx.11258.1.S1_s_at (Chicken Array)   GgaAffx.11258.2.S1_s_at (Chicken Array)   GgaAffx.11258.4.S1_at (Chicken Array)   GgaAffx.11258.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025782
NCBI entrez gene - 422946     See in Manteia.
RefSeq - XM_015286048
RefSeq - XM_015286049
RefSeq - XM_015286050
swissprot - F1P2W2
Ensembl - ENSGALG00000016034
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atrnENSDARG00000062164Danio rerio
 ATRNENSG00000088812Homo sapiens
 AtrnENSMUSG00000027312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATRNL1 / attractin like 1 / Q5VV63* / Q6A051* / Attractin-like protein 1 *ENSGALG0000000915262


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR000859  CUB domain
 IPR001304  C-type lectin-like
 IPR002049  Laminin EGF domain
 IPR002165  Plexin repeat
 IPR006652  Kelch repeat type 1
 IPR013032  EGF-like, conserved site
 IPR015915  Kelch-type beta propeller
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR016201  PSI domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021549 cerebellum development IEA
 biological_processGO:0040014 regulation of multicellular organism growth IEA
 biological_processGO:0042552 myelination IEA
 biological_processGO:0043473 pigmentation IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr