ENSDARG00000063169


Danio rerio

Features
Gene ID: ENSDARG00000063169
  
Biological name :ubn1
  
Synonyms : ubinuclein 1 / ubn1
  
Possible biological names infered from orthology : Q4G0F8 / Q9NPG3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 9258931
Gene end: 9278037
  
Corresponding Affymetrix probe sets: Dr.18507.1.S1_at (Zebrafish Array)   Dr.19053.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000098092
Ensembl peptide - ENSDARP00000113977
Ensembl peptide - ENSDARP00000112932
NCBI entrez gene - 566684     See in Manteia.
RefSeq - NM_001105118
RefSeq Peptide - NP_001098588
swissprot - E9QCV5
swissprot - A0A0J9YIW0
swissprot - F1QFB8
ZFIN ID - ZDB-GENE-070928-28
Ensembl - ENSDARG00000063169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBN1ENSGALG00000031416Gallus gallus
 UBN1ENSG00000118900Homo sapiens
 Ubn1ENSMUSG00000039473Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ubn2b / ubinuclein 2b / UBN2* / Q6ZU65* / Q80WC1* / ubinuclein 2*ENSDARG0000010050833
ubn2a / ubinuclein 2a / UBN2* / Q6ZU65* / Q80WC1* / ubinuclein 2*ENSDARG0000006306233


Protein motifs (from Interpro)
Interpro ID Name
 IPR014840  Hpc2-related domain
 IPR026947  Ubinuclein middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr