ENSG00000118900


Homo sapiens

Features
Gene ID: ENSG00000118900
  
Biological name :UBN1
  
Synonyms : Q9NPG3 / ubinuclein 1 / UBN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 4846665
Gene end: 4882360
  
Corresponding Affymetrix probe sets: 207253_s_at (Human Genome U133 Plus 2.0 Array)   209088_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468776
Ensembl peptide - ENSP00000468143
Ensembl peptide - ENSP00000468740
Ensembl peptide - ENSP00000262376
Ensembl peptide - ENSP00000379894
Ensembl peptide - ENSP00000465309
Ensembl peptide - ENSP00000467942
NCBI entrez gene - 29855     See in Manteia.
OMIM - 609771
RefSeq - XM_017023192
RefSeq - XM_005255278
RefSeq - XM_005255279
RefSeq - XM_011522465
RefSeq - XM_011522466
RefSeq - XM_011522467
RefSeq - XM_017023189
RefSeq - XM_017023190
RefSeq - NM_001079514
RefSeq - NM_001288656
RefSeq - XM_005255277
RefSeq Peptide - NP_001072982
RefSeq Peptide - NP_001275585
swissprot - K7ESM4
swissprot - K7EQR1
swissprot - K7EJT1
swissprot - Q9NPG3
swissprot - K7ER78
Ensembl - ENSG00000118900
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubn1ENSDARG00000063169Danio rerio
 UBN1ENSGALG00000031416Gallus gallus
 Ubn1ENSMUSG00000039473Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
UBN2 / Q6ZU65 / ubinuclein 2ENSG0000015774136


Protein motifs (from Interpro)
Interpro ID Name
 IPR014840  Hpc2-related domain
 IPR026936  Ubinuclein-1
 IPR026947  Ubinuclein middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006336 DNA replication-independent nucleosome assembly IDA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0016032 viral process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005923 bicellular tight junction ISS
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0016605 PML body IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000111875 ASF1A / Q9Y294 / anti-silencing function 1A histone chaperone  / reaction / complex
 ENSG00000100084 HIRA / P54198 / histone cell cycle regulator  / complex / reaction
 ENSG00000099991 CABIN1 / Q9Y6J0 / calcineurin binding protein 1  / reaction / complex
 ENSG00000137309 HMGA1 / P17096 / high mobility group AT-hook 1  / reaction / complex
 ENSG00000189060 H1F0 / P07305 / H1 histone family member 0  / reaction
 ENSG00000149948 HMGA2 / P52926 / high mobility group AT-hook 2  / complex / reaction






 

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