ENSG00000189060


Homo sapiens

Features
Gene ID: ENSG00000189060
  
Biological name :H1F0
  
Synonyms : H1F0 / H1 histone family member 0 / P07305
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: 1
Band: q13.1
Gene start: 37805093
Gene end: 37807436
  
Corresponding Affymetrix probe sets: 208886_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000344504
NCBI entrez gene - 3005     See in Manteia.
OMIM - 142708
RefSeq - NM_005318
RefSeq Peptide - NP_005309
swissprot - P07305
Ensembl - ENSG00000189060
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 h1f0ENSDARG00000038559Danio rerio
 H1F0ENSGALG00000044240Gallus gallus
 H1f0ENSMUSG00000096210Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR005819  Histone H5
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006309 apoptotic DNA fragmentation TAS
 biological_processGO:0006334 nucleosome assembly IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005719 nuclear euchromatin IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003680 AT DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031490 chromatin DNA binding IDA


Pathways (from Reactome)
Pathway description
Activation of DNA fragmentation factor
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000118900 UBN1 / Q9NPG3 / ubinuclein 1  / reaction
 ENSG00000137309 HMGA1 / P17096 / high mobility group AT-hook 1  / reaction
 ENSG00000099991 CABIN1 / Q9Y6J0 / calcineurin binding protein 1  / reaction
 ENSG00000169598 DFFB / O76075 / DNA fragmentation factor subunit beta  / reaction / complex
 ENSG00000111875 ASF1A / Q9Y294 / anti-silencing function 1A histone chaperone  / reaction
 ENSG00000100084 HIRA / P54198 / histone cell cycle regulator  / reaction
 ENSG00000149948 HMGA2 / P52926 / high mobility group AT-hook 2  / reaction






 

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