ENSGALG00000044240


Gallus gallus

Features
Gene ID: ENSGALG00000044240
  
Biological name :H1F0
  
Synonyms : H1F0 / Histone H5 / P02259
  
Possible biological names infered from orthology : H1 histone family member 0 / Histone H1.0 Histone H1.0, N-terminally processed / P07305 / P10922
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 51163992
Gene end: 51164879
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000063019
NCBI entrez gene - 693250     See in Manteia.
RefSeq - NM_001044673
RefSeq Peptide - NP_001038138
swissprot - P02259
Ensembl - ENSGALG00000044240
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 h1f0ENSDARG00000038559Danio rerio
 H1F0ENSG00000189060Homo sapiens
 H1f0ENSMUSG00000096210Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR005819  Histone H5
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IMP
 biological_processGO:0006334 nucleosome assembly IMP
 biological_processGO:0030261 chromosome condensation IEA
 cellular_componentGO:0000786 nucleosome IDA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005719 nuclear euchromatin IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003680 AT DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0031490 chromatin DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IMP


Pathways (from Reactome)
Pathway description
Activation of DNA fragmentation factor
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000030396 HMGA1 / high mobility group AT-hook 1 / Hmga1b* / P17095* / P17096* / High mobility group protein HMG-I/HMG-Y *  / reaction
 ENSGALG00000014887 ASF1A / Q3C1E9 / Histone chaperone ASF1 / Q9CQE6* / Q9Y294* / Histone chaperone ASF1A * / anti-silencing function 1A histone chaperone*  / reaction
 ENSGALG00000033598 HIRA / histone cell cycle regulator / P54198* / Q61666* / Protein HIRA *  / reaction
 ENSGALG00000031416 UBN1 / ubinuclein 1 / Q4G0F8* / Q9NPG3*  / reaction
 ENSGALG00000036295 DFFB / DNA fragmentation factor subunit beta / O54788* / O76075*  / reaction / complex
 ENSGALG00000009875 HMGA2 / high mobility group AT-hook 2 / P52926* / P52927*  / reaction
 ENSGALG00000006363 CABIN1 / calcineurin binding protein 1 / Q9Y6J0*  / reaction






 

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