ENSGALG00000031416


Gallus gallus

Features
Gene ID: ENSGALG00000031416
  
Biological name :UBN1
  
Synonyms : ubinuclein 1 / UBN1
  
Possible biological names infered from orthology : Q4G0F8 / Q9NPG3
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 13288569
Gene end: 13313056
  
Corresponding Affymetrix probe sets: Gga.17271.1.S1_at (Chicken Array)   Gga.18954.1.S1_at (Chicken Array)   GgaAffx.12938.8.S1_s_at (Chicken Array)   GgaAffx.1483.1.A1_s_at (Chicken Array)   GgaAffx.25427.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043930
Ensembl peptide - ENSGALP00000049542
Ensembl peptide - ENSGALP00000047641
Ensembl peptide - ENSGALP00000045943
NCBI entrez gene - 416398     See in Manteia.
RefSeq - XM_015294661
RefSeq - XM_015294656
RefSeq - XM_015294657
RefSeq - XM_015294658
RefSeq - XM_015294659
RefSeq - XM_015294660
RefSeq - NM_001079718
RefSeq - XM_015294649
RefSeq - XM_015294650
RefSeq - XM_015294651
RefSeq - XM_015294652
RefSeq - XM_015294653
RefSeq - XM_015294654
RefSeq Peptide - NP_001073186
swissprot - A0A1D5P9Y4
swissprot - A0A1D5P4M9
swissprot - A0A1D5NZX3
swissprot - A0A1D5NUB6
Ensembl - ENSGALG00000031416
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubn1ENSDARG00000063169Danio rerio
 UBN1ENSG00000118900Homo sapiens
 Ubn1ENSMUSG00000039473Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
UBN2 / ubinuclein-2 / Q6ZU65* / Q80WC1*ENSGALG0000001185438


Protein motifs (from Interpro)
Interpro ID Name
 IPR014840  Hpc2-related domain
 IPR026936  Ubinuclein-1
 IPR026947  Ubinuclein middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006336 DNA replication-independent nucleosome assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016604 nuclear body IEA


Pathways (from Reactome)
Pathway description
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009875 HMGA2 / high mobility group AT-hook 2 / P52926* / P52927*  / reaction / complex
 ENSGALG00000014887 ASF1A / Q3C1E9 / Histone chaperone ASF1 / Q9CQE6* / Q9Y294* / Histone chaperone ASF1A * / anti-silencing function 1A histone chaperone*  / reaction / complex
 ENSGALG00000033598 HIRA / histone cell cycle regulator / P54198* / Q61666* / Protein HIRA *  / reaction / complex
 ENSGALG00000006363 CABIN1 / calcineurin binding protein 1 / Q9Y6J0*  / reaction / complex
 ENSGALG00000030396 HMGA1 / high mobility group AT-hook 1 / Hmga1b* / P17095* / P17096* / High mobility group protein HMG-I/HMG-Y *  / complex / reaction
 ENSGALG00000044240 H1F0 / P02259 / Histone H5 / P07305* / P10922* / H1 histone family member 0* / Histone H1.0 Histone H1.0, N-terminally processed*  / reaction






 

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