ENSMUSG00000039473


Mus musculus

Features
Gene ID: ENSMUSG00000039473
  
Biological name :Ubn1
  
Synonyms : Q4G0F8 / ubinuclein 1 / Ubn1
  
Possible biological names infered from orthology : Q9NPG3
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: A1
Gene start: 5050057
Gene end: 5086289
  
Corresponding Affymetrix probe sets: 10433352 (MoGene1.0st)   1433780_at (Mouse Genome 430 2.0 Array)   1438401_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000061843
Ensembl peptide - ENSMUSP00000155223
Ensembl peptide - ENSMUSP00000155263
Ensembl peptide - ENSMUSP00000155604
NCBI entrez gene - 170644     See in Manteia.
MGI - MGI:1891307
RefSeq - XM_017316886
RefSeq - NM_026666
RefSeq - XM_006521816
RefSeq - XM_006521817
RefSeq - XM_006521819
RefSeq Peptide - NP_080942
RefSeq Peptide - NP_001343249
swissprot - Q4G0F8
Ensembl - ENSMUSG00000039473
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubn1ENSDARG00000063169Danio rerio
 UBN1ENSGALG00000031416Gallus gallus
 UBN1ENSG00000118900Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ubn2 / Q80WC1 / ubinuclein 2 / Q6ZU65*ENSMUSG0000003853836


Protein motifs (from Interpro)
Interpro ID Name
 IPR014840  Hpc2-related domain
 IPR026936  Ubinuclein-1
 IPR026947  Ubinuclein middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006336 DNA replication-independent nucleosome assembly IEA
 biological_processGO:0030216 keratinocyte differentiation TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0016605 PML body IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008134 transcription factor binding ISO


Pathways (from Reactome)
Pathway description
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000022702 Hira / Q61666 / Protein HIRA / P54198* / histone cell cycle regulator*  / complex / reaction
 ENSMUSG00000019857 Asf1a / Q9CQE6 / Histone chaperone ASF1A / Q9Y294* / anti-silencing function 1A histone chaperone*  / complex / reaction
 ENSMUSG00000056758 Hmga2 / P52927 / high mobility group AT-hook 2 / P52926*  / complex / reaction
 ENSMUSG00000046711 Hmga1 / P17095 / High mobility group protein HMG-I/HMG-Y / P17096* / high mobility group AT-hook 1*  / complex / reaction
 ENSMUSG00000096210 H1f0 / P10922 / Histone H1.0 Histone H1.0, N-terminally processed / P07305* / H1 histone family member 0*  / reaction






 

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