ENSGALG00000033598


Gallus gallus

Features
Gene ID: ENSGALG00000033598
  
Biological name :HIRA
  
Synonyms : HIRA / histone cell cycle regulator
  
Possible biological names infered from orthology : P54198 / Protein HIRA / Q61666
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 633288
Gene end: 661006
  
Corresponding Affymetrix probe sets: Gga.2250.1.S1_at (Chicken Array)   Gga.2250.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058465
Ensembl peptide - ENSGALP00000063719
NCBI entrez gene - 374074     See in Manteia.
RefSeq - NM_204232
RefSeq Peptide - NP_989563
swissprot - A0A1L1RXZ0
swissprot - A0A1D5PZQ0
Ensembl - ENSGALG00000033598
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hiraENSDARG00000013434Danio rerio
 HIRAENSG00000100084Homo sapiens
 HiraENSMUSG00000022702Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011494  TUP1-like enhancer of split
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019015  HIRA B motif
 IPR019775  WD40 repeat, conserved site
 IPR031120  WD repeat HIR1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001649 osteoblast differentiation IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006336 DNA replication-independent nucleosome assembly IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007369 gastrulation IEA
 biological_processGO:0042692 muscle cell differentiation IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0032991 protein-containing complex IEA


Pathways (from Reactome)
Pathway description
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009875 HMGA2 / high mobility group AT-hook 2 / P52926* / P52927*  / reaction / complex
 ENSGALG00000014887 ASF1A / Q3C1E9 / Histone chaperone ASF1 / Q9CQE6* / Q9Y294* / Histone chaperone ASF1A * / anti-silencing function 1A histone chaperone*  / reaction / complex
 ENSGALG00000031416 UBN1 / ubinuclein 1 / Q4G0F8* / Q9NPG3*  / complex / reaction
 ENSGALG00000030396 HMGA1 / high mobility group AT-hook 1 / Hmga1b* / P17095* / P17096* / High mobility group protein HMG-I/HMG-Y *  / complex / reaction
 ENSGALG00000006363 CABIN1 / calcineurin binding protein 1 / Q9Y6J0*  / complex / reaction
 ENSGALG00000044240 H1F0 / P02259 / Histone H5 / P07305* / P10922* / H1 histone family member 0* / Histone H1.0 Histone H1.0, N-terminally processed*  / reaction






 

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