ENSDARG00000067593


Danio rerio

Features
Gene ID: ENSDARG00000067593
  
Biological name :sco1
  
Synonyms : sco1 / SCO1 cytochrome c oxidase assembly protein
  
Possible biological names infered from orthology : , mitochondrial / O75880 / Q5SUC9
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 62196672
Gene end: 62203711
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088082
NCBI entrez gene - 796572     See in Manteia.
RefSeq - NM_001309798
RefSeq Peptide - NP_001296727
swissprot - E7FD19
ZFIN ID - ZDB-GENE-140909-1
Ensembl - ENSDARG00000067593
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCO1ENSGALG00000030475Gallus gallus
 SCO1ENSG00000133028Homo sapiens
 Sco1ENSMUSG00000069844Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sco2 / Q5RH02 / SCO2 cytochrome c oxidase assembly protein / O43819* / Q8VCL2* / , mitochondrial *ENSDARG0000004555535


Protein motifs (from Interpro)
Interpro ID Name
 IPR003782  Copper chaperone SCO1/SenC
 IPR012336  Thioredoxin-like fold
 IPR017276  Synthesis of cytochrome c oxidase, Sco1/Sco2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006825 copper ion transport IEA
 biological_processGO:0006878 cellular copper ion homeostasis IEA
 biological_processGO:0008535 respiratory chain complex IV assembly IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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