ENSDARG00000045555


Danio rerio

Features
Gene ID: ENSDARG00000045555
  
Biological name :sco2
  
Synonyms : Q5RH02 / sco2 / SCO2 cytochrome c oxidase assembly protein
  
Possible biological names infered from orthology : , mitochondrial / O43819 / Q8VCL2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 18453702
Gene end: 18455480
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123722
Ensembl peptide - ENSDARP00000149326
NCBI entrez gene - 606683     See in Manteia.
RefSeq - XM_005164771
RefSeq - NM_001045232
RefSeq Peptide - NP_001038697
swissprot - Q5RH02
ZFIN ID - ZDB-GENE-041210-173
Ensembl - ENSDARG00000045555
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCO2ENSG00000284194Homo sapiens
 SCO2ENSG00000130489Homo sapiens
 Sco2ENSMUSG00000091780Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sco1 / SCO1 cytochrome c oxidase assembly protein / O75880*ENSDARG0000006759339


Protein motifs (from Interpro)
Interpro ID Name
 IPR003782  Copper chaperone SCO1/SenC
 IPR012336  Thioredoxin-like fold
 IPR017276  Synthesis of cytochrome c oxidase, Sco1/Sco2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development ISS
 biological_processGO:0006825 copper ion transport IEA
 biological_processGO:0006878 cellular copper ion homeostasis IEA
 biological_processGO:0008535 respiratory chain complex IV assembly IEA
 biological_processGO:0033617 mitochondrial respiratory chain complex IV assembly ISS
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis ISS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0031305 integral component of mitochondrial inner membrane ISS
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0015035 protein disulfide oxidoreductase activity ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr