ENSDARG00000068382


Danio rerio

Features
Gene ID: ENSDARG00000068382
  
Biological name :pglyrp5
  
Synonyms : peptidoglycan recognition protein 5 / pglyrp5
  
Possible biological names infered from orthology : A1A547 / O75594 / O88593 / peptidoglycan recognition protein 1 / peptidoglycan recognition protein 3 / peptidoglycan recognition protein 4 / PGLYRP1 / PGLYRP3 / PGLYRP4 / Q0VB07 / Q96LB8 / Q96LB9
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 40902636
Gene end: 40905901
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064847
NCBI entrez gene - 553387     See in Manteia.
RefSeq - NM_001044321
RefSeq Peptide - NP_001037786
swissprot - F1QTZ2
ZFIN ID - ZDB-GENE-050419-71
Ensembl - ENSDARG00000068382
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O75594ENSG00000008438Homo sapiens
 Q96LB8ENSG00000163218Homo sapiens
 Q96LB9ENSG00000159527Homo sapiens
 A1A547ENSMUSG00000042244Mus musculus
 O88593ENSMUSG00000030413Mus musculus
 Q0VB07ENSMUSG00000042250Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pglyrp2 / peptidoglycan recognition protein 2 / Q8VCS0* / Q96PD5* / N-acetylmuramoyl-L-alanine amidase *ENSDARG0000006299824
pglyrp6 / peptidoglycan recognition protein 6 / Q96PD5* / Q8VCS0* / PGLYRP2* / peptidoglycan recognition protein 2* / N-acetylmuramoyl-L-alanine amidase *ENSDARG0000010364224


Protein motifs (from Interpro)
Interpro ID Name
 IPR002502  N-acetylmuramoyl-L-alanine amidase domain
 IPR006619  Peptidoglycan recognition protein family domain, metazoa/bacteria
 IPR015510  Peptidoglycan recognition protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009253 peptidoglycan catabolic process IEA
 biological_processGO:0042742 defense response to bacterium IMP
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008745 N-acetylmuramoyl-L-alanine amidase activity IDA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Antimicrobial peptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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