ENSDARG00000068404


Danio rerio

Features
Gene ID: ENSDARG00000068404
  
Biological name :tbcb
  
Synonyms : tbcb / tubulin folding cofactor B
  
Possible biological names infered from orthology : CAP-Gly domain containing linker protein 1 / CLIP1 / P30622 / Q922J3
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 37259800
Gene end: 37270740
  
Corresponding Affymetrix probe sets: Dr.860.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000072516
Ensembl peptide - ENSDARP00000120031
NCBI entrez gene - 337350     See in Manteia.
RefSeq - NM_212775
RefSeq Peptide - NP_997940
swissprot - A8DZJ0
swissprot - A8DZI9
ZFIN ID - ZDB-GENE-030131-9296
Ensembl - ENSDARG00000068404
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000016639Gallus gallus
 CLIP1ENSG00000130779Homo sapiens
 Clip1ENSMUSG00000049550Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clip3 / CAP-GLY domain containing linker protein 3 / B9EHT4* / Q96DZ5* / AC006030.1*ENSDARG0000005445627
clip2 / CAP-GLY domain containing linker protein 2 / Q9UDT6* / Q9Z0H8*ENSDARG0000005959625
clip1a / CAP-GLY domain containing linker protein 1aENSDARG0000007872225
CABZ01072096.1ENSDARG0000007948323
CLIP4 / si:dkeyp-47f9.4 / Q8CI96* / Q8N3C7* / CAP-Gly domain-containing linker protein 4 * / CAP-Gly domain containing linker protein family member 4*ENSDARG0000009696119
cep350 / centrosomal protein 350ENSDARG0000005800017
dctn1a / dynactin 1a / DCTN1* / Q14203* / dynactin subunit 1*ENSDARG000000197437
dctn1b / dynactin 1b / DCTN1* / O08788* / Q14203* / dynactin subunit 1* / Mus musculus dynactin 1 (Dctn1), transcript variant 4, mRNA.*ENSDARG000000567537
zgc:103755 / E9Q309* / CEP350* / Q5VT06* / centrosomal protein 350* / Centrosome-associated protein 350 *ENSDARG000001046635


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR000938  CAP Gly-rich domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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