ENSDARG00000054456


Danio rerio

Features
Gene ID: ENSDARG00000054456
  
Biological name :clip3
  
Synonyms : CAP-GLY domain containing linker protein 3 / clip3
  
Possible biological names infered from orthology : AC006030.1 / B9EHT4 / Q96DZ5
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 28989573
Gene end: 29006189
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000071119
NCBI entrez gene - 562450     See in Manteia.
swissprot - A0A0R4J8N1
ZFIN ID - ZDB-GENE-131127-193
Ensembl - ENSDARG00000054456
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC006030.1ENSG00000264324Homo sapiens
 CLIP3ENSG00000105270Homo sapiens
 Clip3ENSMUSG00000013921Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:103755 / E9Q309* / CEP350* / Q5VT06* / centrosomal protein 350* / Centrosome-associated protein 350 *ENSDARG0000010466327
CLIP4 / si:dkeyp-47f9.4 / Q8CI96* / Q8N3C7* / CAP-Gly domain-containing linker protein 4 * / CAP-Gly domain containing linker protein family member 4*ENSDARG0000009696126
clip1a / CAP-GLY domain containing linker protein 1aENSDARG0000007872220
CABZ01072096.1ENSDARG0000007948317
clip2 / CAP-GLY domain containing linker protein 2 / Q9UDT6* / Q9Z0H8*ENSDARG0000005959617
cep350 / centrosomal protein 350ENSDARG0000005800014
tbcb / tubulin folding cofactor B / CLIP1* / P30622* / Q922J3* / CAP-Gly domain containing linker protein 1*ENSDARG0000006840412
dctn1a / dynactin 1a / DCTN1* / Q14203* / dynactin subunit 1*ENSDARG000000197439
dctn1b / dynactin 1b / DCTN1* / O08788* / Q14203* / dynactin subunit 1* / Mus musculus dynactin 1 (Dctn1), transcript variant 4, mRNA.*ENSDARG000000567539


Protein motifs (from Interpro)
Interpro ID Name
 IPR000938  CAP Gly-rich domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Regulation of TNFR1 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000060058 cylda / cylindromatosis (turban tumor syndrome), a / CYLD* / Q80TQ2* / Q9NQC7* / CYLD lysine 63 deubiquitinase* / Ubiquitin carboxyl-terminal hydrolase CYLD *  / reaction / complex






 

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