ENSDARG00000069099


Danio rerio

Features
Gene ID: ENSDARG00000069099
  
Biological name :tmco1
  
Synonyms : Q6DGW9 / tmco1 / transmembrane and coiled-coil domains 1
  
Possible biological names infered from orthology : Calcium load-activated calcium channel / Q921L3 / Q9UM00
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 21104507
Gene end: 21110246
  
Corresponding Affymetrix probe sets: Dr.13739.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000091049
Ensembl peptide - ENSDARP00000106023
NCBI entrez gene - 378980     See in Manteia.
RefSeq - NM_001002575
RefSeq Peptide - NP_001002575
swissprot - Q6DGW9
ZFIN ID - ZDB-GENE-050417-344
Ensembl - ENSDARG00000069099
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMCO1ENSGALG00000033460Gallus gallus
 TMCO1ENSG00000143183Homo sapiens
 Tmco1ENSMUSG00000052428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002809  Integral membrane protein EMC3/TMCO1-like
 IPR008559  Calcium load-activated calcium channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006983 ER overload response ISS
 biological_processGO:0032469 endoplasmic reticulum calcium ion homeostasis IDA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane ISS
 molecular_functionGO:0005262 calcium channel activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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