ENSGALG00000033460


Gallus gallus

Features
Gene ID: ENSGALG00000033460
  
Biological name :TMCO1
  
Synonyms : TMCO1 / transmembrane and coiled-coil domains 1
  
Possible biological names infered from orthology : Calcium load-activated calcium channel / Q921L3 / Q9UM00
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 5499625
Gene end: 5522195
  
Corresponding Affymetrix probe sets: Gga.11775.1.S1_at (Chicken Array)   Gga.2311.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046515
Ensembl peptide - ENSGALP00000058606
Ensembl peptide - ENSGALP00000055569
NCBI entrez gene - 427100     See in Manteia.
RefSeq - XM_424693
swissprot - A0A1L1RIN1
swissprot - A0A1D5PRP1
swissprot - A0A1D5P1H7
Ensembl - ENSGALG00000033460
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmco1ENSDARG00000069099Danio rerio
 TMCO1ENSG00000143183Homo sapiens
 Tmco1ENSMUSG00000052428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002809  Integral membrane protein EMC3/TMCO1-like
 IPR008559  Calcium load-activated calcium channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0032469 endoplasmic reticulum calcium ion homeostasis IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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