ENSDARG00000069142


Danio rerio

Features
Gene ID: ENSDARG00000069142
  
Biological name :aars
  
Synonyms : aars / alanyl-tRNA synthetase
  
Possible biological names infered from orthology : P49588 / Q8BGQ7
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 18636273
Gene end: 18821929
  
Corresponding Affymetrix probe sets: Dr.26416.1.A1_at (Zebrafish Array)   NM_001044310_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000071166
Ensembl peptide - ENSDARP00000091174
Ensembl peptide - ENSDARP00000120649
Ensembl peptide - ENSDARP00000144205
NCBI entrez gene - 324940     See in Manteia.
RefSeq - NM_001044310
RefSeq - XM_005159050
RefSeq Peptide - NP_001037775
swissprot - Q1LVL2
swissprot - Q1LVL3
swissprot - F1QBG7
ZFIN ID - ZDB-GENE-030131-3663
Ensembl - ENSDARG00000069142
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AARSENSGALG00000001965Gallus gallus
 AARSENSG00000090861Homo sapiens
 AarsENSMUSG00000031960Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
aars2 / alanyl-tRNA synthetase 2, mitochondrial (putative) / Q14CH7* / Q5JTZ9* / Alanine--tRNA ligase, mitochondrial * / alanyl-tRNA synthetase 2, mitochondrial*ENSDARG0000010738546


Protein motifs (from Interpro)
Interpro ID Name
 IPR002318  Alanine-tRNA ligase, class IIc
 IPR003156  DHHA1 domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018162  Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
 IPR018164  Alanyl-tRNA synthetase, class IIc, N-terminal
 IPR018165  Alanyl-tRNA synthetase, class IIc, core domain
 IPR023033  Alanine-tRNA ligase, eukaryota/bacteria


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006419 alanyl-tRNA aminoacylation IEA
 biological_processGO:0043039 tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004813 alanine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016597 amino acid binding IBA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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