ENSDARG00000107385


Danio rerio

Features
Gene ID: ENSDARG00000107385
  
Biological name :aars2
  
Synonyms : aars2 / alanyl-tRNA synthetase 2, mitochondrial (putative)
  
Possible biological names infered from orthology : Alanine--tRNA ligase, mitochondrial / alanyl-tRNA synthetase 2, mitochondrial / Q14CH7 / Q5JTZ9
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 25554232
Gene end: 25609123
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113382
Ensembl peptide - ENSDARP00000143932
Ensembl peptide - ENSDARP00000154708
NCBI entrez gene - 100536819     See in Manteia.
NCBI entrez gene - 792787     See in Manteia.
RefSeq - XM_001332352
swissprot - A0A286Y9U5
swissprot - F1RAH7
ZFIN ID - ZDB-GENE-041008-213
Ensembl - ENSDARG00000107385
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AARS2ENSGALG00000035337Gallus gallus
 AARS2ENSG00000124608Homo sapiens
 Aars2ENSMUSG00000023938Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
aars / alanyl-tRNA synthetase / P49588* / Q8BGQ7*ENSDARG0000006914245


Protein motifs (from Interpro)
Interpro ID Name
 IPR002318  Alanine-tRNA ligase, class IIc
 IPR002659  Glycosyl transferase, family 31
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018162  Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
 IPR018164  Alanyl-tRNA synthetase, class IIc, N-terminal
 IPR023033  Alanine-tRNA ligase, eukaryota/bacteria


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IBA
 biological_processGO:0006419 alanyl-tRNA aminoacylation IBA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0043039 tRNA aminoacylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004813 alanine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008378 galactosyltransferase activity IEA
 molecular_functionGO:0016597 amino acid binding IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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