ENSG00000124608


Homo sapiens

Features
Gene ID: ENSG00000124608
  
Biological name :AARS2
  
Synonyms : AARS2 / alanyl-tRNA synthetase 2, mitochondrial / Q5JTZ9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p21.1
Gene start: 44299654
Gene end: 44313326
  
Corresponding Affymetrix probe sets: 230024_at (Human Genome U133 Plus 2.0 Array)   231845_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000244571
NCBI entrez gene - 57505     See in Manteia.
OMIM - 612035
RefSeq - XM_017011112
RefSeq - NM_020745
RefSeq - XM_005249245
RefSeq - XM_011514764
RefSeq Peptide - NP_065796
swissprot - Q5JTZ9
Ensembl - ENSG00000124608
  
Related genetic diseases (OMIM): 614096 - Combined oxidative phosphorylation deficiency 8, 614096
  615889 - Leukoencephalopathy, progressive, with ovarian failure, 615889
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aars2ENSDARG00000107385Danio rerio
 AARS2ENSGALG00000035337Gallus gallus
 Aars2ENSMUSG00000023938Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AARS / P49588 / alanyl-tRNA synthetaseENSG0000009086144


Protein motifs (from Interpro)
Interpro ID Name
 IPR002318  Alanine-tRNA ligase, class IIc
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018162  Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
 IPR018164  Alanyl-tRNA synthetase, class IIc, N-terminal
 IPR018165  Alanyl-tRNA synthetase, class IIc, core domain
 IPR023033  Alanine-tRNA ligase, eukaryota/bacteria


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006419 alanyl-tRNA aminoacylation IEA
 biological_processGO:0033108 mitochondrial respiratory chain complex assembly IMP
 biological_processGO:0043039 tRNA aminoacylation IEA
 biological_processGO:0070143 mitochondrial alanyl-tRNA aminoacylation IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004813 alanine-tRNA ligase activity IMP
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016597 amino acid binding IBA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001522 Death in infancy 
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002180 Neurodegeneration 
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 HP:0002186 Apraxia "A defect in the understanding of complex motor commands and in the execution of certain learned movements, i.e., deficits in the cognitive components of learned movements." [HPO:curators]
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002371 Loss of speech 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0006970 Periventricular leukomalacia 
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 HP:0006980 Leukoencephalopathy, progressive 
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 HP:0008209 Premature ovarian failure 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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