ENSG00000090861


Homo sapiens

Features
Gene ID: ENSG00000090861
  
Biological name :AARS
  
Synonyms : AARS / alanyl-tRNA synthetase / P49588
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q22.1
Gene start: 70252295
Gene end: 70289543
  
Corresponding Affymetrix probe sets: 201000_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261772
Ensembl peptide - ENSP00000455360
NCBI entrez gene - 16     See in Manteia.
OMIM - 601065
RefSeq - NM_001605
RefSeq Peptide - NP_001596
swissprot - P49588
swissprot - H3BPK7
Ensembl - ENSG00000090861
  
Related genetic diseases (OMIM): 613287 - Charcot-Marie-Tooth disease, axonal, type 2N, 613287
  616339 - Epileptic encephalopathy, early infantile, 29, 616339
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aarsENSDARG00000069142Danio rerio
 AARSENSGALG00000001965Gallus gallus
 AarsENSMUSG00000031960Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AARS2 / Q5JTZ9 / alanyl-tRNA synthetase 2, mitochondrialENSG0000012460845


Protein motifs (from Interpro)
Interpro ID Name
 IPR002318  Alanine-tRNA ligase, class IIc
 IPR003156  DHHA1 domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018162  Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
 IPR018164  Alanyl-tRNA synthetase, class IIc, N-terminal
 IPR018165  Alanyl-tRNA synthetase, class IIc, core domain
 IPR023033  Alanine-tRNA ligase, eukaryota/bacteria


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation TAS
 biological_processGO:0006419 alanyl-tRNA aminoacylation IEA
 biological_processGO:0008033 tRNA processing TAS
 biological_processGO:0021680 cerebellar Purkinje cell layer development IEA
 biological_processGO:0043039 tRNA aminoacylation IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 biological_processGO:0050905 neuromuscular process IEA
 biological_processGO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0002161 aminoacyl-tRNA editing activity IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004813 alanine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016597 amino acid binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cytosolic tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000643 Blepharospasm "An involuntary recurrent spasm of both eyelids." [HPO:curators]
Show

 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001284 Areflexia 
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001298 Encephalopathy 
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001511 Intrauterine growth retardation 
Show

 HP:0001761 Pes cavus 
Show

 HP:0001765 Hammer toes 
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
Show

 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
Show

 HP:0002827 Dislocated hips 
Show

 HP:0002936 Distal sensory impairment 
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003429 Hypomyelination 
Show

 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
Show

 HP:0003477 Axonal neuropathy 
Show

 HP:0003577 Onset at birth 
Show

 HP:0003828 Variable expressivity 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0009027 Foot dorsiflexor weakness 
Show

 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
Show

 HP:0200134 Epileptic encephalopathy 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr