ENSDARG00000069545


Danio rerio

Features
Gene ID: ENSDARG00000069545
  
Biological name :atg12
  
Synonyms : atg12 / ATG12 autophagy related 12 homolog (S. cerevisiae)
  
Possible biological names infered from orthology : autophagy related 12 / O94817 / Q9CQY1 / Ubiquitin-like protein ATG12
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 13883872
Gene end: 13888705
  
Corresponding Affymetrix probe sets: Dr.15962.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000092078
Ensembl peptide - ENSDARP00000119284
swissprot - E9QFK9
swissprot - F1Q9E0
ZFIN ID - ZDB-GENE-071205-7
Ensembl - ENSDARG00000069545
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATG12ENSGALG00000002345Gallus gallus
 ATG12ENSG00000145782Homo sapiens
 Atg12ENSMUSG00000032905Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007242  Ubiquitin-like protein Atg12
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006501 C-terminal protein lipidation IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0044804 autophagy of nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0034045 phagophore assembly site membrane IBA
 cellular_componentGO:0034274 Atg12-Atg5-Atg16 complex IBA
 molecular_functionGO:0019776 Atg8 ligase activity IBA


Pathways (from Reactome)
Pathway description
Macroautophagy
Pink/Parkin Mediated Mitophagy
Receptor Mediated Mitophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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