ENSDARG00000070080


Danio rerio

Features
Gene ID: ENSDARG00000070080
  
Biological name :nbeaa
  
Synonyms : nbeaa / neurobeachin a
  
Possible biological names infered from orthology : NBEA / neurobeachin / Q8NFP9 / Q9EPN1
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 34426256
Gene end: 34734995
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116164
Ensembl peptide - ENSDARP00000150774
Ensembl peptide - ENSDARP00000093342
Ensembl peptide - ENSDARP00000099855
NCBI entrez gene - 541373     See in Manteia.
RefSeq - NM_001013500
RefSeq - XM_009305432
RefSeq - XM_009305434
RefSeq Peptide - NP_001013518
swissprot - F1R4P6
swissprot - E7EZD1
swissprot - E9QCE1
swissprot - Q5BJ09
ZFIN ID - ZDB-GENE-050320-68
Ensembl - ENSDARG00000070080
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000017062Gallus gallus
 ENSGALG00000045592Gallus gallus
 NBEAENSG00000172915Homo sapiens
 NbeaENSMUSG00000027799Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nbeab / neurobeachin b / NBEA* / Q9EPN1* / Q8NFP9* / neurobeachin*ENSDARG0000010518479
lrba / LPS-responsive vesicle trafficking, beach and anchor containing / P50851* / LPS responsive beige-like anchor protein*ENSDARG0000003110859
nbeal2 / neurobeachin-like 2 / Q6ZNJ1* / Q6ZQA0* / Neurobeachin-like protein 2 *ENSDARG0000009864118
nbeal1 / neurobeachin-like 1 / Q6ZS30*ENSDARG0000009954717
lyst / lysosomal trafficking regulator / Q99698*ENSDARG0000000857515
wdfy3 / WD repeat and FYVE domain containing 3 / Q6VNB8* / Q8IZQ1*ENSDARG0000007889015
nsmaf / neutral sphingomyelinase (N-SMase) activation associated factor / Q92636* / neutral sphingomyelinase activation associated factor*ENSDARG000000519208
wdfy4 / WDFY family member 4 / Q6ZS81* / WD repeat and FYVE domain containing 4*ENSDARG000000770097
wdr81 / E7FEV0 / WD repeat domain 81 / Q562E7* / Q5ND34*ENSDARG000000797027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000409  BEACH domain
 IPR001680  WD40 repeat
 IPR010508  Domain of unknown function DUF1088
 IPR011989  Armadillo-like helical
 IPR011993  PH-like domain superfamily
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016024  Armadillo-type fold
 IPR017986  WD40-repeat-containing domain
 IPR023362  PH-BEACH domain
 IPR031570  Domain of unknown function DUF4704


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007416 synapse assembly IMP
 biological_processGO:0016358 dendrite development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005209 hindbrain interneuron hindbrain interneuron synapse decreased amount , abnormal
Show

 ZFA:0009149 Mauthner neuron Mauthner neuron synapse assembly process quality , abnormal
Mauthner neuron dendrite complexity , abnormal
Mauthner neuron synapse decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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