ENSDARG00000031108


Danio rerio

Features
Gene ID: ENSDARG00000031108
  
Biological name :lrba
  
Synonyms : LPS-responsive vesicle trafficking, beach and anchor containing / lrba
  
Possible biological names infered from orthology : LPS responsive beige-like anchor protein / P50851
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 23919418
Gene end: 24349789
  
Corresponding Affymetrix probe sets: Dr.26037.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116531
Ensembl peptide - ENSDARP00000143583
Ensembl peptide - ENSDARP00000119601
NCBI entrez gene - 562379     See in Manteia.
swissprot - B8A482
swissprot - A0A286Y8V9
swissprot - F1R6G2
ZFIN ID - ZDB-GENE-090311-19
Ensembl - ENSDARG00000031108
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRBAENSGALG00000010061Gallus gallus
 LRBAENSG00000198589Homo sapiens
 LrbaENSMUSG00000028080Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nbeaa / neurobeachin a / NBEA* / Q9EPN1* / Q8NFP9* / neurobeachin*ENSDARG0000007008062
nbeab / neurobeachin b / NBEA* / Q9EPN1* / Q8NFP9* / neurobeachin*ENSDARG0000010518460
nbeal2 / neurobeachin-like 2 / Q6ZNJ1* / Q6ZQA0* / Neurobeachin-like protein 2 *ENSDARG0000009864119
nbeal1 / neurobeachin-like 1 / Q6ZS30*ENSDARG0000009954718
wdfy3 / WD repeat and FYVE domain containing 3 / Q6VNB8* / Q8IZQ1*ENSDARG0000007889016
lyst / lysosomal trafficking regulator / Q99698*ENSDARG0000000857515
nsmaf / neutral sphingomyelinase (N-SMase) activation associated factor / Q92636* / neutral sphingomyelinase activation associated factor*ENSDARG000000519208
wdfy4 / WDFY family member 4 / Q6ZS81* / WD repeat and FYVE domain containing 4*ENSDARG000000770097
wdr81 / E7FEV0 / WD repeat domain 81 / Q562E7* / Q5ND34*ENSDARG000000797027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000409  BEACH domain
 IPR001680  WD40 repeat
 IPR010508  Domain of unknown function DUF1088
 IPR011989  Armadillo-like helical
 IPR011993  PH-like domain superfamily
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016024  Armadillo-type fold
 IPR017986  WD40-repeat-containing domain
 IPR023362  PH-BEACH domain
 IPR031570  Domain of unknown function DUF4704


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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