ENSDARG00000070124


Danio rerio

Features
Gene ID: ENSDARG00000070124
  
Biological name :ptpn23a
  
Synonyms : protein tyrosine phosphatase, non-receptor type 23, a / ptpn23a
  
Possible biological names infered from orthology : protein tyrosine phosphatase, non-receptor type 23 / PTPN23 / Q6PB44 / Q9H3S7 / Tyrosine-protein phosphatase non-receptor type 23
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 41112346
Gene end: 41131578
  
Corresponding Affymetrix probe sets: Dr.13034.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115750
Ensembl peptide - ENSDARP00000093424
NCBI entrez gene - 100007322     See in Manteia.
RefSeq - XM_005158195
RefSeq - NM_001202507
RefSeq Peptide - NP_001189436
swissprot - F1R1D1
swissprot - F1Q653
ZFIN ID - ZDB-GENE-100921-24
Ensembl - ENSDARG00000070124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTPN23ENSGALG00000038522Gallus gallus
 PTPN23ENSG00000076201Homo sapiens
 Ptpn23ENSMUSG00000036057Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptpn23b / protein tyrosine phosphatase, non-receptor type 23, bENSDARG0000009868931
pdcd6ip / programmed cell death 6 interacting protein / Q8WUM4* / Q9WU78*ENSDARG0000002526910
rhpn2 / rhophilin, Rho GTPase binding protein 2 / Q8BWR8* / Q8IUC4* / Rhophilin-2 *ENSDARG000000145776
rhpn1 / rhophilin, Rho GTPase binding protein 1 / Q61085* / Q8TCX5* / Rhophilin-1 *ENSDARG000000524546


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR004328  BRO1 domain
 IPR016103  ProQ/FinO domain
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR025304  ALIX V-shaped domain
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
 biological_processGO:0060271 cilium assembly IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr