ENSDARG00000071583


Danio rerio

Features
Gene ID: ENSDARG00000071583
  
Biological name :gtf3ab
  
Synonyms : general transcription factor IIIA, b / gtf3ab
  
Possible biological names infered from orthology : general transcription factor IIIA / GTF3A / Q92664 / transcription factor IIIA
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 21640635
Gene end: 21642858
  
Corresponding Affymetrix probe sets: Dr.13601.1.A1_at (Zebrafish Array)   Dr.13601.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000096703
NCBI entrez gene - 100037394     See in Manteia.
RefSeq - NM_001089544
RefSeq Peptide - NP_001083013
swissprot - F1R8L4
ZFIN ID - ZDB-GENE-030131-7698
Ensembl - ENSDARG00000071583
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF3AENSGALG00000017098Gallus gallus
 GTF3AENSG00000122034Homo sapiens
 Gtf3aENSMUSG00000016503Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gtf3aa / general transcription factor IIIAa / GTF3A* / Q92664* / transcription factor IIIA * / general transcription factor IIIA*ENSDARG0000003026741
si:dkey-208k4.2ENSDARG0000010417032
ZXDC / si:dkey-156n14.3 / Q2QGD7* / ZXD family zinc finger C*ENSDARG0000005235128
Q1LYE3 / znf143b / zinc finger protein 143b / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*ENSDARG0000004158122
znf143a / zinc finger protein 143a / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*ENSDARG0000001288721
mtf1 / metal-regulatory transcription factor 1 / Q14872*ENSDARG0000010289821
znf76 / zinc finger protein 76 / Zfp523* / P36508* / Q8BMU0* / zinc finger protein 523*ENSDARG0000001327921
yy1b / YY1 transcription factor b / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*ENSDARG0000002797815
yy1a / YY1 transcription factor a / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*ENSDARG0000004279615
znf410 / zinc finger protein 410 / Q86VK4* / Q8BKX7* / Zfp410*ENSDARG0000000821814


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000014994 tbp / Q7SXL3 / TATA box binding protein / P20226* / P29037*  / complex / reaction
 ENSDARG00000017835 brf1a / BRF1, RNA polymerase III transcription initiation factor a / BRF1* / Q92994* / BRF1, RNA polymerase III transcription initiation factor subunit* / BRF1, RNA polymerase III transcrip...  / reaction / complex






 

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