ENSDARG00000102898


Danio rerio

Features
Gene ID: ENSDARG00000102898
  
Biological name :mtf1
  
Synonyms : metal-regulatory transcription factor 1 / mtf1
  
Possible biological names infered from orthology : Q07243 / Q14872
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 4132537
Gene end: 4168888
  
Corresponding Affymetrix probe sets: Dr.5639.1.S1_at (Zebrafish Array)   NM_152981_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000146080
Ensembl peptide - ENSDARP00000154757
Ensembl peptide - ENSDARP00000148642
Ensembl peptide - ENSDARP00000131126
Ensembl peptide - ENSDARP00000145940
NCBI entrez gene - 195821     See in Manteia.
RefSeq - XM_021466610
RefSeq - XM_021466611
RefSeq - NM_152981
RefSeq Peptide - NP_694513
swissprot - A0A0G2KFP7
swissprot - A0A0B5H7U7
ZFIN ID - ZDB-GENE-020424-1
Ensembl - ENSDARG00000102898
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTF1ENSGALG00000001639Gallus gallus
 MTF1ENSG00000188786Homo sapiens
 Mtf1ENSMUSG00000028890Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q1LYE3 / znf143b / zinc finger protein 143b / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*ENSDARG0000004158118
ZXDC / si:dkey-156n14.3 / Q2QGD7* / ZXD family zinc finger C*ENSDARG0000005235117
znf143a / zinc finger protein 143a / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*ENSDARG0000001288716
znf76 / zinc finger protein 76 / Zfp523* / P36508* / Q8BMU0* / zinc finger protein 523*ENSDARG0000001327915
znf410 / zinc finger protein 410 / Q86VK4* / Q8BKX7* / Zfp410*ENSDARG0000000821811
gtf3aa / general transcription factor IIIAa / GTF3A* / Q92664* / transcription factor IIIA * / general transcription factor IIIA*ENSDARG0000003026710
si:dkey-208k4.2ENSDARG0000010417010
gtf3ab / general transcription factor IIIA, b / GTF3A* / Q92664* / transcription factor IIIA * / general transcription factor IIIA*ENSDARG000000715839
yy1b / YY1 transcription factor b / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*ENSDARG000000279788
yy1a / YY1 transcription factor a / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*ENSDARG000000427968


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010043 response to zinc ion IGI
 biological_processGO:0046686 response to cadmium ion IGI
 biological_processGO:0071276 cellular response to cadmium ion IDA
 biological_processGO:0071294 cellular response to zinc ion IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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