ENSDARG00000073813


Danio rerio

Features
Gene ID: ENSDARG00000073813
  
Biological name :scly
  
Synonyms : scly / selenocysteine lyase
  
Possible biological names infered from orthology : Q96I15
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 27275716
Gene end: 27288989
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128690
Ensembl peptide - ENSDARP00000099679
NCBI entrez gene - 559537     See in Manteia.
RefSeq - NM_001110383
RefSeq Peptide - NP_001103853
swissprot - A8WFT4
swissprot - X1WEN9
ZFIN ID - ZDB-GENE-080204-30
Ensembl - ENSDARG00000073813
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCLYENSGALG00000030194Gallus gallus
 SCLYENSG00000132330Homo sapiens
 SclyENSMUSG00000026307Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfs1 / NFS1 cysteine desulfurase / Q9Y697* / Q9Z1J3* / AL109827.1* / Cysteine desulfurase, mitochondrial *ENSDARG0000006223729


Protein motifs (from Interpro)
Interpro ID Name
 IPR000192  Aminotransferase class V domain
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR016454  Cysteine desulfurase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Metabolism of ingested SeMet, Sec, MeSec into H2Se


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000073813 scly / selenocysteine lyase / Q96I15*  / complex






 

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contact: otassy@igbmc.fr